RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 KCNK15Q9H427 330 aa10.53□□□□□ -0.72
CCHCR1-227ENST00000508852 A3GALT2U3KPV4 340 aa10.53□□□□□ -0.72
CCHCR1-227ENST00000508852 C13orf42A0A1B0GVH6 325 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 LDLRAD4O15165 306 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 MRPS14O60783 128 aaKnown RBP10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 CA2P00918 260 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 EGR2P11161 476 aaPredicted RBP10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 AADACP22760 399 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 TALDO1P37837 337 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 TPPP2P59282 170 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 NDPQ00604 133 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 FABP5Q01469 135 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 FXYD3Q14802 87 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 SSX1Q16384 188 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 RTL8BQ17RB0 113 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 ASPHD1Q5U4P2 390 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 ACSM6Q6P461 480 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 LFNGQ8NES3 379 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 RHOVQ96L33 236 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 GFI1Q99684 422 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 CABLES2Q9BTV7 478 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 RANGRFQ9HD47 186 aaPredicted RBP10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 SLC35D1Q9NTN3 355 aa10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 NKX1-2Q9UD57 310 aaPredicted RBP10.52□□□□□ -0.73
CCHCR1-227ENST00000508852 TMEM272A0A1B0GTI8 110 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 C3orf84H3BNL1 204 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 M0R1X1 148 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 FCN1O00602 326 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 SOX15O60248 233 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 CREBL2O60519 120 aaPredicted RBP10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 TRGV3P03979 118 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 IGKV1-16P04430 117 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 PLAC9Q5JTB6 97 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 Q6ZS49 121 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 ZNF383Q8NA42 475 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 POC5Q8NA72 575 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 OR10R2Q8NGX6 335 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 DLX4Q92988 240 aaPredicted RBP10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 CLCC1Q96S66 551 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 GINS4Q9BRT9 223 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 PARP12Q9H0J9 701 aaKnown RBP10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 TPSG1Q9NRR2 321 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 ZNF355PQ9NSJ1 428 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 STUB1Q9UNE7 303 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 FBXO7Q9Y3I1 522 aa10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 RBM7Q9Y580 266 aaKnown RBP10.51□□□□□ -0.73
CCHCR1-227ENST00000508852 TRBV6-7A0A0A0MS04 114 aa10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 IFITM5A6NNB3 132 aa10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 BET1O15155 118 aa10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 SLC25A17O43808 307 aa10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 SCGNO76038 276 aa10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 SLC22A5O76082 557 aa10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 FCGR3AP08637 254 aa10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 CLDN12P56749 244 aa10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 TATDN3Q17R31 274 aa10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 DRAXINQ8NBI3 349 aaPredicted RBP10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 RBMXL1Q96E39 390 aaKnown RBP10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 CYYR1Q96J86 154 aa10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 OR2D2Q9H210 308 aa10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 ZMAT4Q9H898 229 aa10.5□□□□□ -0.73
CCHCR1-227ENST00000508852 IGHV4OR15-8A0A075B7B6 117 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 A0A087WW49 117 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 IGKV1-6A0A0C4DH72 117 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 TRDV1A0A1B0GX56 115 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 SHOXO15266 292 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 PROP1O75360 226 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 CTXN2P0C2S0 81 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 GP9P14770 177 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 HIST1H1DP16402 221 aaKnown RBP10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 RAB3BP20337 219 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 SLURP1P55000 103 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 ARFRP1Q13795 201 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 VMA21Q3ZAQ7 101 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 TMEM177Q53S58 311 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 FAM209BQ5JX69 171 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 HES5Q5TA89 166 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 TEX45Q8NA69 505 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 GRPEL2Q8TAA5 225 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 NRG4Q8WWG1 115 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 USMG5Q96IX5 58 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 HARBI1Q96MB7 349 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 MS4A10Q96PG2 267 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 FAM103A1Q9BTL3 118 aaKnown RBP10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 ALX4Q9H161 411 aaPredicted RBP10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 NDUFB11Q9NX14 153 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 SDHAF2Q9NX18 166 aa10.49□□□□□ -0.73
CCHCR1-227ENST00000508852 NBEAL2Q6ZNJ1 2754 aa10.48□□□□□ -0.73
CCHCR1-227ENST00000508852 MFNGO00587 321 aa10.48□□□□□ -0.73
CCHCR1-227ENST00000508852 IGHV3-11P01762 117 aa10.48□□□□□ -0.73
CCHCR1-227ENST00000508852 GSTT2P0CG29 244 aa10.48□□□□□ -0.73
CCHCR1-227ENST00000508852 GSTT2BP0CG30 244 aa10.48□□□□□ -0.73
CCHCR1-227ENST00000508852 DTYMKP23919 212 aa10.48□□□□□ -0.73
CCHCR1-227ENST00000508852 GABARAPL2P60520 117 aa10.48□□□□□ -0.73
CCHCR1-227ENST00000508852 ANKRD13BQ86YJ7 626 aa10.48□□□□□ -0.73
CCHCR1-227ENST00000508852 OSR1Q8TAX0 266 aaPredicted RBP10.48□□□□□ -0.73
CCHCR1-227ENST00000508852 RAB26Q9ULW5 256 aa10.48□□□□□ -0.73
CCHCR1-227ENST00000508852 ANKRD65E5RJM6 399 aa10.47□□□□□ -0.73
CCHCR1-227ENST00000508852 H0Y980 276 aa10.47□□□□□ -0.73
CCHCR1-227ENST00000508852 RAB27BO00194 218 aa10.47□□□□□ -0.73
CCHCR1-227ENST00000508852 SPNP16150 400 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms