RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	CNIH2	Q6PI25	160 aa		11.09	□□□□□ -0.63
CCHCR1-222	ENST00000507459	PDPN	Q86YL7	162 aa		11.09	□□□□□ -0.63
CCHCR1-222	ENST00000507459	GVQW1	Q8N7I0	195 aa		11.09	□□□□□ -0.63
CCHCR1-222	ENST00000507459	SAMD12	Q8N8I0	201 aa		11.09	□□□□□ -0.63
CCHCR1-222	ENST00000507459	OR13F1	Q8NGS4	319 aa		11.09	□□□□□ -0.63
CCHCR1-222	ENST00000507459	ABHD5	Q8WTS1	349 aa		11.09	□□□□□ -0.63
CCHCR1-222	ENST00000507459	S100A16	Q96FQ6	103 aa	Known RBP	11.09	□□□□□ -0.63
CCHCR1-222	ENST00000507459	TSNAX	Q99598	290 aa	Known RBP	11.09	□□□□□ -0.63
CCHCR1-222	ENST00000507459	RNF5	Q99942	180 aa		11.09	□□□□□ -0.63
CCHCR1-222	ENST00000507459	AUNIP	Q9H7T9	357 aa		11.09	□□□□□ -0.63
CCHCR1-222	ENST00000507459	ANXA10	Q9UJ72	324 aa		11.09	□□□□□ -0.63
CCHCR1-222	ENST00000507459	A3GALT2	U3KPV4	340 aa		11.09	□□□□□ -0.63
CCHCR1-222	ENST00000507459	TRAV41	A0A0B4J266	112 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	MEIS3P1	A6NDR6	274 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	IGHG4	P01861	327 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	ELANE	P08246	267 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	IGLL1	P15814	213 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	THBS3	P49746	956 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	LUM	P51884	338 aa	Predicted RBP	11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	ARPC4	P59998	168 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	CX3CL1	P78423	397 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	NDP	Q00604	133 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	ECSCR	Q19T08	205 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	BEAN1	Q3B7T3	259 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	UBE2NL	Q5JXB2	153 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	ZNF695	Q8IW36	515 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	BVES	Q8NE79	360 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	BEST4	Q8NFU0	473 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	SLC25A46	Q96AG3	418 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	DUX3	Q96PT4	197 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	FBXO7	Q9Y3I1	522 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	OR2W1	Q9Y3N9	320 aa		11.08	□□□□□ -0.64
CCHCR1-222	ENST00000507459	SLC25A17	O43808	307 aa		11.07	□□□□□ -0.64
CCHCR1-222	ENST00000507459	PRB2	P02812	416 aa	Predicted RBP	11.07	□□□□□ -0.64
CCHCR1-222	ENST00000507459	CBX3	Q13185	183 aa		11.07	□□□□□ -0.64
CCHCR1-222	ENST00000507459	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.07	□□□□□ -0.64
CCHCR1-222	ENST00000507459	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.07	□□□□□ -0.64
CCHCR1-222	ENST00000507459	TMEM65	Q6PI78	240 aa		11.07	□□□□□ -0.64
CCHCR1-222	ENST00000507459	ETV3L	Q6ZN32	361 aa		11.07	□□□□□ -0.64
CCHCR1-222	ENST00000507459	WFDC9	Q8NEX5	89 aa		11.07	□□□□□ -0.64
CCHCR1-222	ENST00000507459	FAM103A1	Q9BTL3	118 aa	Known RBP	11.07	□□□□□ -0.64
CCHCR1-222	ENST00000507459	NAA50	Q9GZZ1	169 aa	Known RBP	11.07	□□□□□ -0.64
CCHCR1-222	ENST00000507459	COMMD3	Q9UBI1	195 aa		11.07	□□□□□ -0.64
CCHCR1-222	ENST00000507459	ZNF580	Q9UK33	172 aa		11.07	□□□□□ -0.64
CCHCR1-222	ENST00000507459	IGKV1D-13	A0A0B4J2D9	117 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	SHOX	O15266	292 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	XRCC3	O43542	346 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	TUSC2	O75896	110 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	CA2	P00918	260 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	HLA-DQB1	P01920	261 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	IGKV1-13	P0DP09	117 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	PSMB8	P28062	276 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	PPIF	P30405	207 aa	Known RBP	11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	DUT	P33316	252 aa	Known RBP	11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	RTL8B	Q17RB0	113 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	DEFB136	Q30KP8	78 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	TMEM69	Q5SWH9	247 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	HOGA1	Q86XE5	327 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	MRPL41	Q8IXM3	137 aa	Known RBP	11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	ZNF645	Q8N7E2	425 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	RNF152	Q8N8N0	203 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	HARBI1	Q96MB7	349 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	KLK15	Q9H2R5	256 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459	TPSG1	Q9NRR2	321 aa		11.06	□□□□□ -0.64
CCHCR1-222	ENST00000507459		A0A1W2PN81	502 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	LINC00473	A8K010	186 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	SPDEF	O95238	335 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	IGLV2-23	P01705	113 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	RRAS	P10301	218 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	SLC6A1	P30531	599 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	CHRNA7	P36544	502 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	MYCNOS	P40205	109 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	CDX1	P47902	265 aa	Predicted RBP	11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	LGALS7	P47929	136 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	RAB25	P57735	213 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	GNB1	P62873	340 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	TAGLN	Q01995	201 aa	Known RBP	11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	GPR107	Q5VW38	600 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	PPP1R27	Q86WC6	154 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	LINC00482	Q8N8I6	264 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	CASTOR1	Q8WTX7	329 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	KCTD12	Q96CX2	325 aa	Known RBP	11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	RAX2	Q96IS3	184 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	ADTRP	Q96IZ2	230 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	MRPS26	Q9BYN8	205 aa	Known RBP	11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	IFT46	Q9NQC8	304 aa		11.05	□□□□□ -0.64
CCHCR1-222	ENST00000507459	SRRM4	A7MD48	611 aa	Known RBP	11.04	□□□□□ -0.64
CCHCR1-222	ENST00000507459	CCL24	O00175	119 aa		11.04	□□□□□ -0.64
CCHCR1-222	ENST00000507459	FCGR3B	O75015	233 aa		11.04	□□□□□ -0.64
CCHCR1-222	ENST00000507459	CNIH1	O95406	144 aa		11.04	□□□□□ -0.64
CCHCR1-222	ENST00000507459	CRYZL1	O95825	349 aa		11.04	□□□□□ -0.64
CCHCR1-222	ENST00000507459	EIF4E	P06730	217 aa	Known RBP	11.04	□□□□□ -0.64
CCHCR1-222	ENST00000507459	EGR2	P11161	476 aa	Predicted RBP	11.04	□□□□□ -0.64
CCHCR1-222	ENST00000507459	AADAC	P22760	399 aa		11.04	□□□□□ -0.64
CCHCR1-222	ENST00000507459	FCGR2C	P31995	323 aa		11.04	□□□□□ -0.64
CCHCR1-222	ENST00000507459	CBX5	P45973	191 aa		11.04	□□□□□ -0.64
CCHCR1-222	ENST00000507459	TAS2R20	P59543	309 aa		11.04	□□□□□ -0.64
CCHCR1-222	ENST00000507459	PJVK	Q0ZLH3	352 aa		11.04	□□□□□ -0.64
CCHCR1-222	ENST00000507459	FXYD3	Q14802	87 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms