RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TOMM20LQ6UXN7 152 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 WDR31Q8NA23 367 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 OCIAD1Q9NX40 245 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 IL17BQ9UHF5 180 aa14.91□□□□□ -0.02
NUP54-205ENST00000507257 A0A0G2JMM0 328 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 A0A1W2PPB8 328 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 A0A1W2PRS3 328 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 KIR3DP1A8MWS1 328 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 KITLGP21583 273 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 TIMP3P35625 211 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 GFRA1P56159 465 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 LINC00310P59036 64 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 CST9LP1Q5W188 147 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 OR2Y1Q8NGV0 311 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 THOC3Q96J01 351 aaKnown RBP14.9□□□□□ -0.02
NUP54-205ENST00000507257 ZDHHC11Q9H8X9 412 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 LPAR2Q9HBW0 351 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 KCNIP1Q9NZI2 227 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 LY96Q9Y6Y9 160 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 TRBV9A0A0B4J1U6 114 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 RBFOX2O43251 390 aaKnown RBP eCLIP14.9□□□□□ -0.02
NUP54-205ENST00000507257 MMP23AO75900 390 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 IL6RP08887 468 aaPredicted RBP14.9□□□□□ -0.02
NUP54-205ENST00000507257 ATP5G3P48201 142 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 ERVK11-1P61568 191 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 MRPS11P82912 194 aaKnown RBP14.9□□□□□ -0.02
NUP54-205ENST00000507257 OR10G8Q8NGN5 311 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 TMEM204Q9BSN7 226 aa14.9□□□□□ -0.02
NUP54-205ENST00000507257 A0A1B0GUS0 222 aa14.89□□□□□ -0.03
NUP54-205ENST00000507257 A0A1W2PR80 420 aa14.89□□□□□ -0.03
NUP54-205ENST00000507257 GALR2O43603 387 aaPredicted RBP14.89□□□□□ -0.03
NUP54-205ENST00000507257 ZG16O60844 167 aa14.89□□□□□ -0.03
NUP54-205ENST00000507257 OR2H2O95918 312 aa14.89□□□□□ -0.03
NUP54-205ENST00000507257 NGFP01138 241 aa14.89□□□□□ -0.03
NUP54-205ENST00000507257 NPSP0C0P6 89 aa14.89□□□□□ -0.03
NUP54-205ENST00000507257 CD82P27701 267 aa14.89□□□□□ -0.03
NUP54-205ENST00000507257 AARDQ4LEZ3 155 aa14.89□□□□□ -0.03
NUP54-205ENST00000507257 WIPI1Q5MNZ9 446 aaPredicted RBP14.89□□□□□ -0.03
NUP54-205ENST00000507257 ZNF114Q8NC26 417 aa14.89□□□□□ -0.03
NUP54-205ENST00000507257 VAMP8Q9BV40 100 aa14.89□□□□□ -0.03
NUP54-205ENST00000507257 IL36BQ9NZH7 164 aa14.89□□□□□ -0.03
NUP54-205ENST00000507257 LNP1A1A4G5 178 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 RAMP3O60896 148 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 RFPL3SP0C7P2 107 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 CRISP2P16562 243 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 G6PCP35575 357 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 PLA2G5P39877 138 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 ZNF146Q15072 292 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 OR5T1Q8NG75 326 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 OR2J1Q9GZK6 312 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 PLA2G3Q9NZ20 509 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 POLDIP2Q9Y2S7 368 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 BRWD1Q9NSI6 2320 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 YLPM1P49750 1951 aaKnown RBP14.88□□□□□ -0.03
NUP54-205ENST00000507257 CNTRLQ7Z7A1 2325 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 CCL2P13500 99 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 OPRK1P41145 380 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 OR5AU1Q8NGC0 362 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 OR4B1Q8NGF8 309 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 TAAR6Q96RI8 345 aa14.88□□□□□ -0.03
NUP54-205ENST00000507257 SDK2Q58EX2 2172 aa14.87□□□□□ -0.03
NUP54-205ENST00000507257 TRBV20OR9-2A0A075B6H5 130 aa14.87□□□□□ -0.03
NUP54-205ENST00000507257 RHBDL1O75783 438 aa14.87□□□□□ -0.03
NUP54-205ENST00000507257 IGHV3-9P01782 118 aa14.87□□□□□ -0.03
NUP54-205ENST00000507257 CRYAAP02489 173 aa14.87□□□□□ -0.03
NUP54-205ENST00000507257 STAG3L2P0CL84 134 aa14.87□□□□□ -0.03
NUP54-205ENST00000507257 STAG3L3P0CL85 134 aa14.87□□□□□ -0.03
NUP54-205ENST00000507257 PLP2Q04941 152 aa14.87□□□□□ -0.03
NUP54-205ENST00000507257 COL5A1-AS1Q5SY13 56 aa14.87□□□□□ -0.03
NUP54-205ENST00000507257 DERL1Q9BUN8 251 aa14.87□□□□□ -0.03
NUP54-205ENST00000507257 QTRT1Q9BXR0 403 aaKnown RBP14.87□□□□□ -0.03
NUP54-205ENST00000507257 AURKAIP1Q9NWT8 199 aaPredicted RBP14.87□□□□□ -0.03
NUP54-205ENST00000507257 A0A1W2PPV4 95 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 ZNF503-AS2A6NEH8 195 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 C15orf62A8K5M9 175 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 C9JCJ5 164 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 SERF1AO75920 110 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 S1PR2O95136 353 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 IGHEP01854 428 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 RAC2P15153 192 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 CD1BP29016 333 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 COMPP49747 757 aaPredicted RBP14.86□□□□□ -0.03
NUP54-205ENST00000507257 RPL30P62888 115 aaKnown RBP14.86□□□□□ -0.03
NUP54-205ENST00000507257 ARSJQ5FYB0 599 aaPredicted RBP14.86□□□□□ -0.03
NUP54-205ENST00000507257 CYB5R2Q6BCY4 276 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 TCF23Q7RTU1 214 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 PRR18Q8N4B5 295 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 ZNF784Q8NCA9 323 aaPredicted RBP14.86□□□□□ -0.03
NUP54-205ENST00000507257 HSPB9Q9BQS6 159 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 RTL8AQ9BWD3 113 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 ZNF703Q9H7S9 590 aaPredicted RBP14.86□□□□□ -0.03
NUP54-205ENST00000507257 SZT2Q5T011 3432 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 A0A096LPE4 126 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 TRAV39A0A0B4J263 110 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 A0A1W2PPZ6 126 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 FAM90A9PA6NNJ1 464 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 TRAPPC6AO75865 159 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 CXorf1O96002 111 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 H2BFWTQ7Z2G1 175 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 ZDHHC16Q969W1 377 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms