RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 RAB25P57735 213 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 NEDD8Q15843 81 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 ECSCRQ19T08 205 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 OR11H1Q8NG94 326 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 LGALS14Q8TCE9 139 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 NUDCD2Q8WVJ2 157 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 C4orf3Q8WVX3 66 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 SLC25A38Q96DW6 304 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 GON7Q9BXV9 100 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 OR2D2Q9H210 308 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.78□□□□□ -0.84
HSPG2-212ENST00000493940 METTL1Q9UBP6 276 aaKnown RBP9.78□□□□□ -0.84
HSPG2-212ENST00000493940 SSR3Q9UNL2 185 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 RRP15Q9Y3B9 282 aaKnown RBP9.78□□□□□ -0.84
HSPG2-212ENST00000493940 A3GALT2U3KPV4 340 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 A0A1W2PN81 502 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 TMEM235A6NFC5 223 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 LINC00473A8K010 186 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 SLC25A17O43808 307 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 CA2P00918 260 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 IGLV2-14P01704 120 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 TFAP2AP05549 437 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 PTHLHP12272 177 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 SLC6A1P30531 599 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 CHRNA7P36544 502 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 RPS16P62249 146 aaKnown RBP9.77□□□□□ -0.85
HSPG2-212ENST00000493940 ZNF660Q6AZW8 331 aaPredicted RBP9.77□□□□□ -0.85
HSPG2-212ENST00000493940 SFXN4Q6P4A7 337 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 Q6ZS49 121 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 H1FOOQ8IZA3 346 aaPredicted RBP9.77□□□□□ -0.85
HSPG2-212ENST00000493940 DDB2Q92466 427 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 FCGR1BQ92637 280 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 ST6GALNAC5Q9BVH7 336 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 GHITMQ9H3K2 345 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 KIAA1456Q9P272 454 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 ZNF221Q9UK13 617 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 RYR3Q15413 4870 aa9.77□□□□□ -0.85
HSPG2-212ENST00000493940 IGKV1D-13A0A0B4J2D9 117 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 LOC100506127A0A0U1RQW1 187 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 METTL21EPA6NDL7 271 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 DUS4LO95620 317 aaKnown RBP9.76□□□□□ -0.85
HSPG2-212ENST00000493940 IGKV1-13P0DP09 117 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 CD36P16671 472 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 RPL30P62888 115 aaKnown RBP9.76□□□□□ -0.85
HSPG2-212ENST00000493940 ARFRP1Q13795 201 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 SRSF7Q16629 238 aaKnown RBP eCLIP9.76□□□□□ -0.85
HSPG2-212ENST00000493940 HACD4Q5VWC8 232 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 TPRA1Q86W33 373 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 PPP1R27Q86WC6 154 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 BVESQ8NE79 360 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 LFNGQ8NES3 379 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 OR10J5Q8NHC4 309 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 UBE2E2Q96LR5 201 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 MS4A10Q96PG2 267 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 RNF5Q99942 180 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 Q9H521 79 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 SLC35D1Q9NTN3 355 aa9.76□□□□□ -0.85
HSPG2-212ENST00000493940 RBMXL2O75526 392 aaKnown RBP9.75□□□□□ -0.85
HSPG2-212ENST00000493940 RBBP9O75884 186 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 OR5H8P0DN80 308 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 NFYAP23511 347 aaPredicted RBP9.75□□□□□ -0.85
HSPG2-212ENST00000493940 DUTP33316 252 aaKnown RBP9.75□□□□□ -0.85
HSPG2-212ENST00000493940 SERPINB10P48595 397 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 BRWD1-AS2P59051 145 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 RUNX1Q01196 453 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 PLGLAQ15195 96 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 KCTD21Q4G0X4 260 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 DEFB121Q5J5C9 76 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 VAX1Q5SQQ9 334 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 ZNF562Q6V9R5 426 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 GVQW1Q8N7I0 195 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.75□□□□□ -0.85
HSPG2-212ENST00000493940 OR1N2Q8NGR9 330 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 GPHA2Q96T91 129 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 VSIG4Q9Y279 399 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 TENM3Q9P273 2699 aa9.75□□□□□ -0.85
HSPG2-212ENST00000493940 IGHV3-11P01762 117 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 FCER2P06734 321 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 DTYMKP23919 212 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 TALDO1P37837 337 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 SLURP1P55000 103 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 MRPS15P82914 257 aaKnown RBP9.74□□□□□ -0.85
HSPG2-212ENST00000493940 DEFA5Q01523 94 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 AKIRIN2Q53H80 203 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 TMEM177Q53S58 311 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 IDNKQ5T6J7 187 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 C11orf87Q6NUJ2 197 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 TMEM65Q6PI78 240 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 UNQ5815/PRO19632Q6UWF5 114 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 IDO2Q6ZQW0 420 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 PDPNQ86YL7 162 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 DCUN1D4Q92564 292 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 DLX4Q92988 240 aaPredicted RBP9.74□□□□□ -0.85
HSPG2-212ENST00000493940 FLYWCH2Q96CP2 140 aaKnown RBP9.74□□□□□ -0.85
HSPG2-212ENST00000493940 YIPF6Q96EC8 236 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 PRR25Q96S07 402 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 RHBDL2Q9NX52 303 aa9.74□□□□□ -0.85
HSPG2-212ENST00000493940 FOXA2Q9Y261 457 aaPredicted RBP9.74□□□□□ -0.85
HSPG2-212ENST00000493940 IGHV4OR15-8A0A075B7B6 117 aa9.73□□□□□ -0.85
HSPG2-212ENST00000493940 A0A087WW49 117 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms