RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 C5orf30Q96GV9 206 aa14.02□□□□□ -0.17
PTPRU-207ENST00000492954 UBE2E2Q96LR5 201 aa14.02□□□□□ -0.17
PTPRU-207ENST00000492954 TSNAXQ99598 290 aaKnown RBP14.02□□□□□ -0.17
PTPRU-207ENST00000492954 OR51E2Q9H255 320 aa14.02□□□□□ -0.17
PTPRU-207ENST00000492954 FOXA2Q9Y261 457 aaPredicted RBP14.02□□□□□ -0.17
PTPRU-207ENST00000492954 VSIG4Q9Y279 399 aa14.02□□□□□ -0.17
PTPRU-207ENST00000492954 I3L521 148 aa14.01□□□□□ -0.17
PTPRU-207ENST00000492954 TALDO1P37837 337 aa14.01□□□□□ -0.17
PTPRU-207ENST00000492954 GNB1P62873 340 aa14.01□□□□□ -0.17
PTPRU-207ENST00000492954 DEFB121Q5J5C9 76 aa14.01□□□□□ -0.17
PTPRU-207ENST00000492954 ASPHD1Q5U4P2 390 aa14.01□□□□□ -0.17
PTPRU-207ENST00000492954 CASTOR1Q8WTX7 329 aa14.01□□□□□ -0.17
PTPRU-207ENST00000492954 FAM103A1Q9BTL3 118 aaKnown RBP14.01□□□□□ -0.17
PTPRU-207ENST00000492954 TPSG1Q9NRR2 321 aa14.01□□□□□ -0.17
PTPRU-207ENST00000492954 SLC35D1Q9NTN3 355 aa14.01□□□□□ -0.17
PTPRU-207ENST00000492954 SDHAF2Q9NX18 166 aa14.01□□□□□ -0.17
PTPRU-207ENST00000492954 DAPK2Q9UIK4 370 aa14.01□□□□□ -0.17
PTPRU-207ENST00000492954 SSR3Q9UNL2 185 aa14.01□□□□□ -0.17
PTPRU-207ENST00000492954 NUBP2Q9Y5Y2 271 aa14.01□□□□□ -0.17
PTPRU-207ENST00000492954 IGKV1D-8A0A087WSZ0 117 aa14□□□□□ -0.17
PTPRU-207ENST00000492954 SPDEFO95238 335 aa14□□□□□ -0.17
PTPRU-207ENST00000492954 DIRAS3O95661 229 aa14□□□□□ -0.17
PTPRU-207ENST00000492954 CA2P00918 260 aa14□□□□□ -0.17
PTPRU-207ENST00000492954 RUNX1Q01196 453 aa14□□□□□ -0.17
PTPRU-207ENST00000492954 CDNFQ49AH0 187 aa14□□□□□ -0.17
PTPRU-207ENST00000492954 TPRA1Q86W33 373 aa14□□□□□ -0.17
PTPRU-207ENST00000492954 PPP1R27Q86WC6 154 aa14□□□□□ -0.17
PTPRU-207ENST00000492954 FLYWCH2Q96CP2 140 aaKnown RBP14□□□□□ -0.17
PTPRU-207ENST00000492954 GINS4Q9BRT9 223 aa14□□□□□ -0.17
PTPRU-207ENST00000492954 RRP15Q9Y3B9 282 aaKnown RBP14□□□□□ -0.17
PTPRU-207ENST00000492954 SEC14L6B5MCN3 397 aa13.99□□□□□ -0.17
PTPRU-207ENST00000492954 SLC25A17O43808 307 aa13.99□□□□□ -0.17
PTPRU-207ENST00000492954 DGCR2P98153 550 aa13.99□□□□□ -0.17
PTPRU-207ENST00000492954 SRSF7Q16629 238 aaKnown RBP eCLIP13.99□□□□□ -0.17
PTPRU-207ENST00000492954 C9orf66Q5T8R8 295 aa13.99□□□□□ -0.17
PTPRU-207ENST00000492954 SFXN4Q6P4A7 337 aa13.99□□□□□ -0.17
PTPRU-207ENST00000492954 UNQ5815/PRO19632Q6UWF5 114 aa13.99□□□□□ -0.17
PTPRU-207ENST00000492954 ZNF562Q6V9R5 426 aa13.99□□□□□ -0.17
PTPRU-207ENST00000492954 Q6ZS49 121 aa13.99□□□□□ -0.17
PTPRU-207ENST00000492954 TCTEX1D1Q8N7M0 179 aa13.99□□□□□ -0.17
PTPRU-207ENST00000492954 OR1N2Q8NGR9 330 aa13.99□□□□□ -0.17
PTPRU-207ENST00000492954 ALX4Q9H161 411 aaPredicted RBP13.99□□□□□ -0.17
PTPRU-207ENST00000492954 RNF167Q9H6Y7 350 aa13.99□□□□□ -0.17
PTPRU-207ENST00000492954 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.99□□□□□ -0.17
PTPRU-207ENST00000492954 RBM7Q9Y580 266 aaKnown RBP13.99□□□□□ -0.17
PTPRU-207ENST00000492954 DTYMKP23919 212 aa13.98□□□□□ -0.17
PTPRU-207ENST00000492954 SDC2P34741 201 aa13.98□□□□□ -0.17
PTPRU-207ENST00000492954 MXD1Q05195 221 aa13.98□□□□□ -0.17
PTPRU-207ENST00000492954 ZNF616Q08AN1 781 aa13.98□□□□□ -0.17
PTPRU-207ENST00000492954 TMEM267Q0VDI3 215 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-207ENST00000492954 ARL6IP1Q15041 203 aa13.98□□□□□ -0.17
PTPRU-207ENST00000492954 ACTBL2Q562R1 376 aa13.98□□□□□ -0.17
PTPRU-207ENST00000492954 H1FOOQ8IZA3 346 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-207ENST00000492954 LFNGQ8NES3 379 aa13.98□□□□□ -0.17
PTPRU-207ENST00000492954 LGALS14Q8TCE9 139 aa13.98□□□□□ -0.17
PTPRU-207ENST00000492954 ARPC1AQ92747 370 aa13.98□□□□□ -0.17
PTPRU-207ENST00000492954 ST6GALNAC5Q9BVH7 336 aa13.98□□□□□ -0.17
PTPRU-207ENST00000492954 LOC100506127A0A0U1RQW1 187 aa13.97□□□□□ -0.17
PTPRU-207ENST00000492954 TMEM235A6NFC5 223 aa13.97□□□□□ -0.17
PTPRU-207ENST00000492954 IGLV2-23P01705 113 aa13.97□□□□□ -0.17
PTPRU-207ENST00000492954 CLEC2LP0C7M8 214 aa13.97□□□□□ -0.17
PTPRU-207ENST00000492954 OR8U8P0C7N1 319 aa13.97□□□□□ -0.17
PTPRU-207ENST00000492954 NEDD8Q15843 81 aa13.97□□□□□ -0.17
PTPRU-207ENST00000492954 AKIRIN2Q53H80 203 aa13.97□□□□□ -0.17
PTPRU-207ENST00000492954 HACD4Q5VWC8 232 aa13.97□□□□□ -0.17
PTPRU-207ENST00000492954 GRPEL2Q8TAA5 225 aa13.97□□□□□ -0.17
PTPRU-207ENST00000492954 NUDCD2Q8WVJ2 157 aa13.97□□□□□ -0.17
PTPRU-207ENST00000492954 ZMAT5Q9UDW3 170 aaKnown RBP13.97□□□□□ -0.17
PTPRU-207ENST00000492954 SCOCQ9UIL1 159 aa13.97□□□□□ -0.17
PTPRU-207ENST00000492954 ARPC1BO15143 372 aaKnown RBP13.96□□□□□ -0.17
PTPRU-207ENST00000492954 SSBP2P81877 361 aaPredicted RBP13.96□□□□□ -0.17
PTPRU-207ENST00000492954 FXYD3Q14802 87 aa13.96□□□□□ -0.17
PTPRU-207ENST00000492954 ZNF260Q3ZCT1 412 aa13.96□□□□□ -0.17
PTPRU-207ENST00000492954 BVESQ8NE79 360 aa13.96□□□□□ -0.17
PTPRU-207ENST00000492954 HARBI1Q96MB7 349 aa13.96□□□□□ -0.17
PTPRU-207ENST00000492954 MS4A10Q96PG2 267 aa13.96□□□□□ -0.17
PTPRU-207ENST00000492954 CENPOQ9BU64 300 aa13.96□□□□□ -0.17
PTPRU-207ENST00000492954 COL7A1Q02388 2944 aa13.95□□□□□ -0.18
PTPRU-207ENST00000492954 J3QRK9 145 aa13.95□□□□□ -0.18
PTPRU-207ENST00000492954 RAMP3O60896 148 aa13.95□□□□□ -0.18
PTPRU-207ENST00000492954 CRYGBP07316 175 aa13.95□□□□□ -0.18
PTPRU-207ENST00000492954 LGALS1P09382 135 aaKnown RBP13.95□□□□□ -0.18
PTPRU-207ENST00000492954 CD36P16671 472 aa13.95□□□□□ -0.18
PTPRU-207ENST00000492954 LGALS7P47929 136 aa13.95□□□□□ -0.18
PTPRU-207ENST00000492954 PJVKQ0ZLH3 352 aa13.95□□□□□ -0.18
PTPRU-207ENST00000492954 CBX3Q13185 183 aa13.95□□□□□ -0.18
PTPRU-207ENST00000492954 RTL8BQ17RB0 113 aa13.95□□□□□ -0.18
PTPRU-207ENST00000492954 KCTD21Q4G0X4 260 aa13.95□□□□□ -0.18
PTPRU-207ENST00000492954 PYHIN1Q6K0P9 492 aa13.95□□□□□ -0.18
PTPRU-207ENST00000492954 DCUN1D4Q92564 292 aa13.95□□□□□ -0.18
PTPRU-207ENST00000492954 RHBDL2Q9NX52 303 aa13.95□□□□□ -0.18
PTPRU-207ENST00000492954 SRRM4A7MD48 611 aaKnown RBP13.94□□□□□ -0.18
PTPRU-207ENST00000492954 SHOXO15266 292 aa13.94□□□□□ -0.18
PTPRU-207ENST00000492954 SSX5O60225 188 aa13.94□□□□□ -0.18
PTPRU-207ENST00000492954 SCGNO76038 276 aa13.94□□□□□ -0.18
PTPRU-207ENST00000492954 CNIH1O95406 144 aa13.94□□□□□ -0.18
PTPRU-207ENST00000492954 IGHV3-11P01762 117 aa13.94□□□□□ -0.18
PTPRU-207ENST00000492954 DUTP33316 252 aaKnown RBP13.94□□□□□ -0.18
PTPRU-207ENST00000492954 ECI1P42126 302 aa13.94□□□□□ -0.18
PTPRU-207ENST00000492954 SLURP1P55000 103 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms