RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 RAB22AQ9UL26 194 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 FBXO7Q9Y3I1 522 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 LSM4Q9Y4Z0 139 aaKnown RBP7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 WSB1Q9Y6I7 421 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 SORL1Q92673 2214 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 TRAV41A0A0B4J266 112 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 TMEM272A0A1B0GTI8 110 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 IFITM5A6NNB3 132 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 TRDCB7Z8K6 153 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 RAMP3O60896 148 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 RAB3BP20337 219 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 VEGFCP49767 419 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 RAB9AP51151 201 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 DGCR2P98153 550 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 NDPQ00604 133 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 SRSF7Q16629 238 aaKnown RBP eCLIP7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 DEFB136Q30KP8 78 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 FAM131AQ6UXB0 335 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 ZNF562Q6V9R5 426 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 Q6ZS49 121 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 NR2C2APQ86WQ0 139 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 ZNF383Q8NA42 475 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 OR56B1Q8NGI3 324 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 OR5M8Q8NGP6 311 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 EDARADDQ8WWZ3 215 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 DPF1Q92782 380 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 B9D2Q9BPU9 175 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 GNB4Q9HAV0 340 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 VSIG4Q9Y279 399 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 WASHC3Q9Y3C0 194 aa7.55□□□□□ -1.2
TMEM39A-210ENST00000490099 MFNGO00587 321 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 CRYGBP07316 175 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 RAB6AP20340 208 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 SDC2P34741 201 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 RORCP51449 518 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 OR10A3P58181 314 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 SSBP2P81877 361 aaPredicted RBP7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 SPCS2Q15005 226 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 PSG5Q15238 335 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 MOGAT2Q3SYC2 334 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 AKIRIN2Q53H80 203 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 C9orf66Q5T8R8 295 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 TCTEX1D1Q8N7M0 179 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 OR4A4PQ8NGN8 299 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 AP3S1Q92572 193 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 CMSS1Q9BQ75 279 aaKnown RBP7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 CABLES2Q9BTV7 478 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 FBXL15Q9H469 300 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 CHMP1AQ9HD42 196 aaPredicted RBP7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 RDH8Q9NYR8 311 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 CCDC59Q9P031 241 aaKnown RBP7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
TMEM39A-210ENST00000490099 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 TRBV6-7A0A0A0MS04 114 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 NOTOA8MTQ0 251 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 FABP7O15540 132 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 SPDEFO95238 335 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 BRI3O95415 125 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 IGKV1-16P04430 117 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 FCGR3AP08637 254 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 INSL3P51460 131 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 LINC00205P59089 165 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 GNB1P62873 340 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 MXD1Q05195 221 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 DCTN2Q13561 401 aaKnown RBP7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 VAX1Q5SQQ9 334 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 HES5Q5TA89 166 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 GLDNQ6ZMI3 551 aaPredicted RBP7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 DRAXINQ8NBI3 349 aaPredicted RBP7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 OR11H1Q8NG94 326 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 OR1N2Q8NGR9 330 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 OR10R2Q8NGX6 335 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 SETD6Q8TBK2 473 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 DYNC2LI1Q8TCX1 351 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 SLC25A46Q96AG3 418 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 RAB3CQ96E17 227 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 RNF167Q9H6Y7 350 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 PARP11Q9NR21 331 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 PTTG2Q9NZH5 202 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 KIAA1456Q9P272 454 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 RNF150Q9ULK6 438 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 FOXA2Q9Y261 457 aaPredicted RBP7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 TNCP24821 2201 aa7.53□□□□□ -1.2
TMEM39A-210ENST00000490099 SEC14L6B5MCN3 397 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 HSPA12AO43301 675 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 IGLV2-23P01705 113 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 GSTP1P09211 210 aaKnown RBP7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 OR8U8P0C7N1 319 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 GSTT2P0CG29 244 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 GSTT2BP0CG30 244 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 HIST1H1DP16402 221 aaKnown RBP7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 ZNF182P17025 639 aaPredicted RBP7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 RPS19P39019 145 aaKnown RBP7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 ZNF616Q08AN1 781 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 TMEM267Q0VDI3 215 aaPredicted RBP7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 MRGPRG-AS1Q2M3A8 158 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 CNPY1Q3B7I2 92 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 IGSF11Q5DX21 431 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms