RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ZNF831Q5JPB2 1677 aa2.75□□□□□ -1.97
ECHDC1-217ENST00000488087 PDCD11Q14690 1871 aaKnown RBP2.75□□□□□ -1.97
ECHDC1-217ENST00000488087 WDR90Q96KV7 1748 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 IGKV6D-21A0A0A0MT36 114 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 IGHV7-81A0A0B4J1V7 117 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 LRP5LA4QPB2 252 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 TMEM235A6NFC5 223 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 OR51F1A6NGY5 319 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 GJE1A6NN92 205 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 CEACAM18A8MTB9 384 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 SERPINE3A8MV23 424 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 FTCDNL1E5RQL4 147 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 G3V4G9 280 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 PRAMEF26H0Y7S4 382 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 DCTN6O00399 190 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 FCN1O00602 326 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 SCAMP2O15127 329 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 TAPBPO15533 448 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 SNAI1O95863 264 aaPredicted RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 CA1P00915 261 aaPredicted RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 TRGC2P03986 189 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 HSPB1P04792 205 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 TYMSP04818 313 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 ARG1P05089 322 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 CXCL1P09341 107 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 CD37P11049 281 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 CSRP1P21291 193 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 VDAC1P21796 283 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 RPS4Y1P22090 263 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 CD1BP29016 333 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 GPR4P46093 362 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 POLR2HP52434 150 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 ATP1B3P54709 279 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 LIM2P55344 173 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 TAS2R31P59538 309 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 UBE2NP61088 152 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 ERVS71-1P61550 626 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 RAB11AP62491 216 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 ZNF616Q08AN1 781 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 FOXF1Q12946 379 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 IL15RAQ13261 267 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 DHRS2Q13268 280 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 MADCAM1Q13477 382 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 VGLL4Q14135 290 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 GPNMBQ14956 572 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 CDK5R1Q15078 307 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 MRPL23Q16540 153 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 TMEM183BQ1AE95 376 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 SMIM21Q3B7S5 101 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 ACOT6Q3I5F7 207 aaPredicted RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 TIGITQ495A1 244 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 SOHLH1Q5JUK2 328 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 KHDRBS2Q5VWX1 349 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 REEP3Q6NUK4 255 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 NOXRED1Q6NXP6 359 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 KCNIP4Q6PIL6 250 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 DNM1P34Q6PK57 102 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 TMEM205Q6UW68 189 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 SBSNQ6UWP8 590 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 TOMM20LQ6UXN7 152 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 TMPPEQ6ZT21 453 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 SMIM5Q71RC9 77 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 PPP1R27Q86WC6 154 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 PNKDQ8N490 385 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 C14orf178Q8N769 122 aaPredicted RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 ZNF738Q8NE65 137 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 OR4D9Q8NGE8 314 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 OR51D1Q8NGF3 324 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 OR51A2Q8NGJ7 313 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 OR1L6Q8NGR2 347 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 OR6K2Q8NGY2 324 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 OR5B3Q8NH48 314 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 LGALS14Q8TCE9 139 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 GPX8Q8TED1 209 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 TSEN15Q8WW01 171 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 GPR146Q96CH1 333 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 DDIT4LQ96D03 193 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 C10orf35Q96D05 121 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 SMIM19Q96E16 107 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 SEH1LQ96EE3 360 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 TVP23CQ96ET8 276 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 SMIM14Q96QK8 99 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 GPR21Q99679 349 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 MCHR1Q99705 422 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 VPS25Q9BRG1 176 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 NIPSNAP3BQ9BS92 247 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 ZNF702PQ9H963 129 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 TAF9BQ9HBM6 251 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 LYRM4Q9HD34 91 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 SCML2Q9UQR0 700 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 MRPS16Q9Y3D3 137 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 MRPS18BQ9Y676 258 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 CHD5Q8TDI0 1954 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 LOC285556D6RIA3 1793 aa2.74□□□□□ -1.97
ECHDC1-217ENST00000488087 LRRK1Q38SD2 2015 aa2.73□□□□□ -1.97
ECHDC1-217ENST00000488087 ZNF236Q9UL36 1845 aa2.73□□□□□ -1.97
ECHDC1-217ENST00000488087 IGKV6-21A0A0C4DH24 114 aa2.73□□□□□ -1.97
ECHDC1-217ENST00000488087 A0A1B0GWB2 263 aa2.73□□□□□ -1.97
ECHDC1-217ENST00000488087 FAM166BA8MTA8 275 aa2.73□□□□□ -1.97
ECHDC1-217ENST00000488087 ZNF705GA8MUZ8 300 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms