RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 LIN7CQ9NUP9 197 aaKnown RBP6.5□□□□□ -1.37
RBM28-206ENST00000487602 DPM3Q9P2X0 92 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 ITGB1BP2Q9UKP3 347 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 AMMECR1Q9Y4X0 333 aaPredicted RBP6.5□□□□□ -1.37
RBM28-206ENST00000487602 TMEM56-RWDD3S4R434 201 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 ABCA1O95477 2261 aa6.5□□□□□ -1.37
RBM28-206ENST00000487602 CENPVL3A0A0U1RRI6 287 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 A0A1W2PRD5 423 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 A0A1W2PRF3 423 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 A0A1W2PRM7 423 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 DBX1A6NMT0 343 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 LEUTXA8MZ59 168 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 CDS2O95674 445 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 GAPDHP04406 335 aaKnown RBP6.49□□□□□ -1.37
RBM28-206ENST00000487602 TRAPPC2P0DI81 140 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 TRAPPC2BP0DI82 140 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 SULT1A3P0DMM9 295 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 SULT1A4P0DMN0 295 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 HTR1DP28221 377 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 KIR2DS2P43631 304 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 LPAR6P43657 344 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 LGALS4P56470 323 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 BRWD1-AS2P59051 145 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 LINC00205P59089 165 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 SRPXP78539 464 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 ZNF816Q0VGE8 651 aaPredicted RBP6.49□□□□□ -1.37
RBM28-206ENST00000487602 DIAPH2-AS1Q14236 149 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 FCN2Q15485 313 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 C2orf68Q2NKX9 166 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 ZNF585BQ52M93 769 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 LDLRAD2Q5SZI1 272 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 TPTE2P1Q5T6R2 138 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 MINOS1Q5TGZ0 78 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 LIN54Q6MZP7 749 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 TGIF2LXQ8IUE1 241 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 PDZD9Q8IXQ8 264 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 SELENOHQ8IZQ5 122 aaKnown RBP6.49□□□□□ -1.37
RBM28-206ENST00000487602 LGI3Q8N145 548 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 CIARTQ8N365 385 aaPredicted RBP6.49□□□□□ -1.37
RBM28-206ENST00000487602 LRTM2Q8N967 370 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 ZNF383Q8NA42 475 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 DRAXINQ8NBI3 349 aaPredicted RBP6.49□□□□□ -1.37
RBM28-206ENST00000487602 CD300LFQ8TDQ1 290 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 DDB2Q92466 427 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 NABP2Q9BQ15 211 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 MRPL20Q9BYC9 149 aaKnown RBP6.49□□□□□ -1.37
RBM28-206ENST00000487602 PRR13Q9NZ81 148 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 PRELID3BQ9Y3B1 194 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 MINOS1-NBL1R4GNA1 71 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 CR1P17927 2039 aa6.49□□□□□ -1.37
RBM28-206ENST00000487602 CSPG4Q6UVK1 2322 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 SMAD7O15105 426 aaKnown RBP6.48□□□□□ -1.37
RBM28-206ENST00000487602 RBFOX2O43251 390 aaKnown RBP eCLIP6.48□□□□□ -1.373e-11■□□□□ 9.1
RBM28-206ENST00000487602 FCGR3BO75015 233 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 AVPP01185 164 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 SERPINE2P07093 398 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 RPA2P15927 270 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 HLA-GP17693 338 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 EPHA1P21709 976 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 CEACAM3P40198 252 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 REG1BP48304 166 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 TAGLNQ01995 201 aaKnown RBP6.48□□□□□ -1.37
RBM28-206ENST00000487602 MIDNQ504T8 468 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 LHFPL4Q7Z7J7 247 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 ZNF695Q8IW36 515 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 SPAG16Q8N0X2 631 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 OR11H7Q8NGC8 314 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 OR5AN1Q8NGI8 311 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 LHFPL5Q8TAF8 219 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 IL22RA2Q969J5 263 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 RPEQ96AT9 228 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 C18orf12Q96KH6 178 aa6.48□□□□□ -1.37
RBM28-206ENST00000487602 TBL2Q9Y4P3 447 aaKnown RBP6.48□□□□□ -1.37
RBM28-206ENST00000487602 FLNAP21333 2647 aaKnown RBP6.48□□□□□ -1.37
RBM28-206ENST00000487602 AKAP9Q99996 3911 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 PIGBOS1A0A0B4J2F0 54 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 IGHV1-69DA0A0B4J2H0 117 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 IGHV1-3A0A0C4DH29 117 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 DUXBA0A1W2PPF3 345 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 A8MV72 311 aaPredicted RBP6.47□□□□□ -1.37
RBM28-206ENST00000487602 OOSP1A8MZH6 123 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 H0YJW9 148 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 NPFFO15130 113 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 TXNL1O43396 289 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 RAMP3O60896 148 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 HPRT1P00492 218 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 IGKV1-39P01597 117 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 IGHV1-69P01742 117 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 APOA2P02652 100 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 IGKV1D-39P04432 117 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 HOXB5P09067 269 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 IGHV4-38-2P0DP08 117 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 RRASP10301 218 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 CXCL3P19876 107 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 MC5RP33032 325 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 OR2B11Q5JQS5 317 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 GPR157Q5UAW9 335 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 TMEM268Q5VZI3 342 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 GGNBP1Q5YKI7 109 aa6.47□□□□□ -1.37
RBM28-206ENST00000487602 LYZL2Q7Z4W2 148 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms