RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 MRPL20Q9BYC9 149 aaKnown RBP11.79□□□□□ -0.52
GCA-210ENST00000487445 PRELID3BQ9Y3B1 194 aa11.79□□□□□ -0.52
GCA-210ENST00000487445 AUP1Q9Y679 476 aa11.79□□□□□ -0.52
GCA-210ENST00000487445 SVEP1Q4LDE5 3571 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 DSCAML1Q8TD84 2053 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 TRAV20A0A0B4J274 112 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 A0A0B4J2A0 478 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 C5orf51A6NDU8 294 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 SMAD7O15105 426 aaKnown RBP11.78□□□□□ -0.52
GCA-210ENST00000487445 CDS2O95674 445 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 TRAPPC2P0DI81 140 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 TRAPPC2BP0DI82 140 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 CT45A6P0DMU7 189 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 CT45A5P0DMU8 189 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 CT45A7P0DMV0 189 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 HTR1DP28221 377 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 LPAR6P43657 344 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 THBS3P49746 956 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 LGALS4P56470 323 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 SRPXP78539 464 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 TGIF2LXQ8IUE1 241 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 CIARTQ8N365 385 aaPredicted RBP11.78□□□□□ -0.52
GCA-210ENST00000487445 SLC35G3Q8N808 338 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 ZNF383Q8NA42 475 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 ST6GALNAC6Q969X2 333 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 RPEQ96AT9 228 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 C1orf159Q96HA4 380 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 RANGRFQ9HD47 186 aaPredicted RBP11.78□□□□□ -0.52
GCA-210ENST00000487445 SHPKQ9UHJ6 478 aa11.78□□□□□ -0.52
GCA-210ENST00000487445 AMMECR1Q9Y4X0 333 aaPredicted RBP11.78□□□□□ -0.52
GCA-210ENST00000487445 CCDC168Q8NDH2 2452 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 IGHV3OR16-10A0A075B7F0 116 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 DBX1A6NMT0 343 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 B3GALNT1O75752 331 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 IGHV4-31P0DP07 118 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 RPA2P15927 270 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 H2BFSP57053 126 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 BRWD1-AS2P59051 145 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 ZNF585BQ52M93 769 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 LHFPL4Q7Z7J7 247 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 SELENOHQ8IZQ5 122 aaKnown RBP11.77□□□□□ -0.52
GCA-210ENST00000487445 SEC22AQ96IW7 307 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 TMEM56Q96MV1 263 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 PDCD10Q9BUL8 212 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 HILPDAQ9Y5L2 63 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 TMEM56-RWDD3S4R434 201 aa11.77□□□□□ -0.52
GCA-210ENST00000487445 PRRC2AP48634 2157 aaKnown RBP11.77□□□□□ -0.53
GCA-210ENST00000487445 DOCK11Q5JSL3 2073 aa11.77□□□□□ -0.53
GCA-210ENST00000487445 MPTX1A8MV57 137 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 LEUTXA8MZ59 168 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 IFNA21P01568 189 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 UBE2E1P51965 193 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 LDLRAD2Q5SZI1 272 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 GGNBP1Q5YKI7 109 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 RNASE11Q8TAA1 199 aaKnown RBP11.76□□□□□ -0.53
GCA-210ENST00000487445 RBPMSQ93062 196 aaKnown RBP11.76□□□□□ -0.53
GCA-210ENST00000487445 ADTRPQ96IZ2 230 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 FYTTD1Q96QD9 318 aaKnown RBP11.76□□□□□ -0.53
GCA-210ENST00000487445 ZNF436Q9C0F3 470 aaPredicted RBP11.76□□□□□ -0.53
GCA-210ENST00000487445 RAB18Q9NP72 206 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 DPM3Q9P2X0 92 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 ODF3BA8MYP8 253 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 H7C2Y5 167 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 S1PR2O95136 353 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 GAPDHP04406 335 aaKnown RBP11.76□□□□□ -0.53
GCA-210ENST00000487445 GATA3P23771 443 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 PAX6P26367 422 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 GZMKP49863 264 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 ZNF137PP52743 207 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 MOB3BQ86TA1 216 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 LRTM2Q8N967 370 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 OR5M8Q8NGP6 311 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 CD300LFQ8TDQ1 290 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 DDB2Q92466 427 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 WDR89Q96FK6 387 aaPredicted RBP11.76□□□□□ -0.53
GCA-210ENST00000487445 C18orf12Q96KH6 178 aa11.76□□□□□ -0.53
GCA-210ENST00000487445 ITPR2Q14571 2701 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 IGHV3-72A0A0B4J1Y9 119 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 CENPVL3A0A0U1RRI6 287 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 KRASP01116 189 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 IGKV1-39P01597 117 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 IGKV1D-39P04432 117 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 CEACAM3P40198 252 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 AKR1C2P52895 323 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 SSX2Q16385 188 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 TPTE2P1Q5T6R2 138 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 FAM71F2Q6NXP2 309 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 GSG1LQ6UXU4 331 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 ST6GAL2Q96JF0 529 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 NABP2Q9BQ15 211 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 SLC35D1Q9NTN3 355 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 GSKIPQ9P0R6 139 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 NOTCH2Q04721 2471 aa11.75□□□□□ -0.53
GCA-210ENST00000487445 TRAV40A0A0B4J280 105 aa11.74□□□□□ -0.53
GCA-210ENST00000487445 LY6LH3BQJ8 138 aa11.74□□□□□ -0.53
GCA-210ENST00000487445 CRYZL1O95825 349 aa11.74□□□□□ -0.53
GCA-210ENST00000487445 APOA2P02652 100 aa11.74□□□□□ -0.53
GCA-210ENST00000487445 EPHA1P21709 976 aa11.74□□□□□ -0.53
GCA-210ENST00000487445 G6PCP35575 357 aa11.74□□□□□ -0.53
GCA-210ENST00000487445 CYB5R2Q6BCY4 276 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms