RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 RNF5Q99942 180 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 GINS4Q9BRT9 223 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 KLK15Q9H2R5 256 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 NECAP2Q9NVZ3 263 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 GAB2Q9UQC2 676 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 SCGNO76038 276 aa10.07□□□□□ -0.8
HDAC1-209ENST00000484305 IGLV1-40P01703 118 aa10.07□□□□□ -0.8
HDAC1-209ENST00000484305 APOA2P02652 100 aa10.07□□□□□ -0.8
HDAC1-209ENST00000484305 EGR2P11161 476 aaPredicted RBP10.07□□□□□ -0.8
HDAC1-209ENST00000484305 SCAND1P57086 179 aa10.07□□□□□ -0.8
HDAC1-209ENST00000484305 C19orf54Q5BKX5 351 aa10.07□□□□□ -0.8
HDAC1-209ENST00000484305 ZNF660Q6AZW8 331 aaPredicted RBP10.07□□□□□ -0.8
HDAC1-209ENST00000484305 PDPNQ86YL7 162 aa10.07□□□□□ -0.8
HDAC1-209ENST00000484305 MINDY2Q8NBR6 621 aa10.07□□□□□ -0.8
HDAC1-209ENST00000484305 CLCC1Q96S66 551 aa10.07□□□□□ -0.8
HDAC1-209ENST00000484305 DCSTAMPQ9H295 470 aa10.07□□□□□ -0.8
HDAC1-209ENST00000484305 SLC35D1Q9NTN3 355 aa10.07□□□□□ -0.8
HDAC1-209ENST00000484305 METTL1Q9UBP6 276 aaKnown RBP10.07□□□□□ -0.8
HDAC1-209ENST00000484305 RBM7Q9Y580 266 aaKnown RBP10.07□□□□□ -0.8
HDAC1-209ENST00000484305 ETV7Q9Y603 341 aa10.07□□□□□ -0.8
HDAC1-209ENST00000484305 TRAV18A0A075B6X5 111 aa10.06□□□□□ -0.8
HDAC1-209ENST00000484305 CCL24O00175 119 aa10.06□□□□□ -0.8
HDAC1-209ENST00000484305 AIREO43918 545 aa10.06□□□□□ -0.8
HDAC1-209ENST00000484305 DUS4LO95620 317 aaKnown RBP10.06□□□□□ -0.8
HDAC1-209ENST00000484305 RPS19P39019 145 aaKnown RBP10.06□□□□□ -0.8
HDAC1-209ENST00000484305 CRIP2P52943 208 aaPredicted RBP10.06□□□□□ -0.8
HDAC1-209ENST00000484305 GNG2P59768 71 aa10.06□□□□□ -0.8
HDAC1-209ENST00000484305 LSM3P62310 102 aaKnown RBP10.06□□□□□ -0.8
HDAC1-209ENST00000484305 PITPNAQ00169 270 aa10.06□□□□□ -0.8
HDAC1-209ENST00000484305 KIAA0141Q14154 515 aaPredicted RBP10.06□□□□□ -0.8
HDAC1-209ENST00000484305 ECSCRQ19T08 205 aa10.06□□□□□ -0.8
HDAC1-209ENST00000484305 TIMM50Q3ZCQ8 353 aa10.06□□□□□ -0.8
HDAC1-209ENST00000484305 REC114Q7Z4M0 266 aa10.06□□□□□ -0.8
HDAC1-209ENST00000484305 MYOZ3Q8TDC0 251 aa10.06□□□□□ -0.8
HDAC1-209ENST00000484305 FLYWCH2Q96CP2 140 aaKnown RBP10.06□□□□□ -0.8
HDAC1-209ENST00000484305 TSNAXQ99598 290 aaKnown RBP10.06□□□□□ -0.8
HDAC1-209ENST00000484305 VCX3AQ9NNX9 186 aa10.06□□□□□ -0.8
HDAC1-209ENST00000484305 TPSG1Q9NRR2 321 aa10.06□□□□□ -0.8
HDAC1-209ENST00000484305 AURKAIP1Q9NWT8 199 aaPredicted RBP10.06□□□□□ -0.8
HDAC1-209ENST00000484305 NUBP2Q9Y5Y2 271 aa10.06□□□□□ -0.8
HDAC1-209ENST00000484305 J3QRK9 145 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 SLC25A17O43808 307 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 SOX15O60248 233 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 SPDEFO95238 335 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 IGLV2-23P01705 113 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 NFYAP23511 347 aaPredicted RBP10.05□□□□□ -0.8
HDAC1-209ENST00000484305 RAB9AP51151 201 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 KRTAP10-11P60412 298 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 TMEM65Q6PI78 240 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 ZNF491Q8N8L2 437 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 BVESQ8NE79 360 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 C4orf3Q8WVX3 66 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 FAM103A1Q9BTL3 118 aaKnown RBP10.05□□□□□ -0.8
HDAC1-209ENST00000484305 GNB4Q9HAV0 340 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 SPATA2Q9UM82 520 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 A3GALT2U3KPV4 340 aa10.05□□□□□ -0.8
HDAC1-209ENST00000484305 DNAH3Q8TD57 4116 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 A0A1W2PN81 502 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 TRIM64CA6NLI5 447 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 LINC00473A8K010 186 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 CA2P00918 260 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 CTXN2P0C2S0 81 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 PTHLHP12272 177 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 HOXD3P31249 432 aaPredicted RBP10.04□□□□□ -0.8
HDAC1-209ENST00000484305 DUTP33316 252 aaKnown RBP10.04□□□□□ -0.8
HDAC1-209ENST00000484305 CHRNA7P36544 502 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 RAB25P57735 213 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 CNIH2Q6PI25 160 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 ZNF562Q6V9R5 426 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 PPP1R27Q86WC6 154 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 GVQW1Q8N7I0 195 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 ABHD5Q8WTS1 349 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 CASTOR1Q8WTX7 329 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 DDB2Q92466 427 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 UBE2E2Q96LR5 201 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 ANXA10Q9UJ72 324 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 OR2W1Q9Y3N9 320 aa10.04□□□□□ -0.8
HDAC1-209ENST00000484305 A0A0A6YYH2 397 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 IGKV1D-13A0A0B4J2D9 117 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 A6NJ64 397 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 SRRM4A7MD48 611 aaKnown RBP10.03□□□□□ -0.8
HDAC1-209ENST00000484305 I3L521 148 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 ARPC1BO15143 372 aaKnown RBP10.03□□□□□ -0.8
HDAC1-209ENST00000484305 TMEM127O75204 238 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 HLA-DQB1P01920 261 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 CRYGBP07316 175 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 IGKV1-13P0DP09 117 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 LGALS7P47929 136 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 LUMP51884 338 aaPredicted RBP10.03□□□□□ -0.8
HDAC1-209ENST00000484305 SSBP2P81877 361 aaPredicted RBP10.03□□□□□ -0.8
HDAC1-209ENST00000484305 TAGLNQ01995 201 aaKnown RBP10.03□□□□□ -0.8
HDAC1-209ENST00000484305 TMEM267Q0VDI3 215 aaPredicted RBP10.03□□□□□ -0.8
HDAC1-209ENST00000484305 PJVKQ0ZLH3 352 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 AKIRIN2Q53H80 203 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 TMEM177Q53S58 311 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 UNQ5815/PRO19632Q6UWF5 114 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 CROCCP3Q8IVE0 287 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 ZNF645Q8N7E2 425 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 LFNGQ8NES3 379 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 OR11H1Q8NG94 326 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms