RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 CTXN2P0C2S0 81 aa17.82■□□□□ 0.44
TRAF4-211ENST00000478021 PSG5Q15238 335 aa17.82■□□□□ 0.44
TRAF4-211ENST00000478021 CXorf66Q5JRM2 361 aaPredicted RBP17.82■□□□□ 0.44
TRAF4-211ENST00000478021 UBE2NLQ5JXB2 153 aa17.82■□□□□ 0.44
TRAF4-211ENST00000478021 ETV3LQ6ZN32 361 aa17.82■□□□□ 0.44
TRAF4-211ENST00000478021 SLC25A46Q96AG3 418 aa17.82■□□□□ 0.44
TRAF4-211ENST00000478021 ZFP57Q9NU63 452 aa17.82■□□□□ 0.44
TRAF4-211ENST00000478021 FBXO7Q9Y3I1 522 aa17.82■□□□□ 0.44
TRAF4-211ENST00000478021 MEIS3P1A6NDR6 274 aa17.81■□□□□ 0.44
TRAF4-211ENST00000478021 IGHG4P01861 327 aa17.81■□□□□ 0.44
TRAF4-211ENST00000478021 FOXE3Q13461 319 aa17.81■□□□□ 0.44
TRAF4-211ENST00000478021 BEAN1Q3B7T3 259 aa17.81■□□□□ 0.44
TRAF4-211ENST00000478021 BVESQ8NE79 360 aa17.81■□□□□ 0.44
TRAF4-211ENST00000478021 BEST4Q8NFU0 473 aa17.81■□□□□ 0.44
TRAF4-211ENST00000478021 ABHD5Q8WTS1 349 aa17.81■□□□□ 0.44
TRAF4-211ENST00000478021 FLYWCH2Q96CP2 140 aaKnown RBP17.81■□□□□ 0.44
TRAF4-211ENST00000478021 TSNAXQ99598 290 aaKnown RBP17.81■□□□□ 0.44
TRAF4-211ENST00000478021 RNF5Q99942 180 aa17.81■□□□□ 0.44
TRAF4-211ENST00000478021 TPSG1Q9NRR2 321 aa17.81■□□□□ 0.44
TRAF4-211ENST00000478021 OR2W1Q9Y3N9 320 aa17.81■□□□□ 0.44
TRAF4-211ENST00000478021 NOTCH1P46531 2555 aa17.81■□□□□ 0.44
TRAF4-211ENST00000478021 TRAV41A0A0B4J266 112 aa17.8■□□□□ 0.44
TRAF4-211ENST00000478021 ELANEP08246 267 aa17.8■□□□□ 0.44
TRAF4-211ENST00000478021 THBS3P49746 956 aa17.8■□□□□ 0.44
TRAF4-211ENST00000478021 LUMP51884 338 aaPredicted RBP17.8■□□□□ 0.44
TRAF4-211ENST00000478021 ARPC4P59998 168 aa17.8■□□□□ 0.44
TRAF4-211ENST00000478021 CX3CL1P78423 397 aa17.8■□□□□ 0.44
TRAF4-211ENST00000478021 ECSCRQ19T08 205 aa17.8■□□□□ 0.44
TRAF4-211ENST00000478021 S100A16Q96FQ6 103 aaKnown RBP17.8■□□□□ 0.44
TRAF4-211ENST00000478021 DUX3Q96PT4 197 aa17.8■□□□□ 0.44
TRAF4-211ENST00000478021 ZNF580Q9UK33 172 aa17.8■□□□□ 0.44
TRAF4-211ENST00000478021 A3GALT2U3KPV4 340 aa17.8■□□□□ 0.44
TRAF4-211ENST00000478021 IGKV1D-13A0A0B4J2D9 117 aa17.79■□□□□ 0.44
TRAF4-211ENST00000478021 XRCC3O43542 346 aa17.79■□□□□ 0.44
TRAF4-211ENST00000478021 SLC25A17O43808 307 aa17.79■□□□□ 0.44
TRAF4-211ENST00000478021 OR5H8P0DN80 308 aa17.79■□□□□ 0.44
TRAF4-211ENST00000478021 IGKV1-13P0DP09 117 aa17.79■□□□□ 0.44
TRAF4-211ENST00000478021 IGLL1P15814 213 aa17.79■□□□□ 0.44
TRAF4-211ENST00000478021 HOGA1Q86XE5 327 aa17.79■□□□□ 0.44
TRAF4-211ENST00000478021 ZNF695Q8IW36 515 aa17.79■□□□□ 0.44
TRAF4-211ENST00000478021 MRPS26Q9BYN8 205 aaKnown RBP17.79■□□□□ 0.44
TRAF4-211ENST00000478021 LINC00473A8K010 186 aa17.78■□□□□ 0.44
TRAF4-211ENST00000478021 SPDEFO95238 335 aa17.78■□□□□ 0.44
TRAF4-211ENST00000478021 CA2P00918 260 aa17.78■□□□□ 0.44
TRAF4-211ENST00000478021 HLA-DQB1P01920 261 aa17.78■□□□□ 0.44
TRAF4-211ENST00000478021 EIF4EP06730 217 aaKnown RBP17.78■□□□□ 0.44
TRAF4-211ENST00000478021 PSMB8P28062 276 aa17.78■□□□□ 0.44
TRAF4-211ENST00000478021 PPIFP30405 207 aaKnown RBP17.78■□□□□ 0.44
TRAF4-211ENST00000478021 DUTP33316 252 aaKnown RBP17.78■□□□□ 0.44
TRAF4-211ENST00000478021 CBX3Q13185 183 aa17.78■□□□□ 0.44
TRAF4-211ENST00000478021 GPR107Q5VW38 600 aa17.78■□□□□ 0.44
TRAF4-211ENST00000478021 ZNF660Q6AZW8 331 aaPredicted RBP17.78■□□□□ 0.44
TRAF4-211ENST00000478021 ZNF645Q8N7E2 425 aa17.78■□□□□ 0.44
TRAF4-211ENST00000478021 WFDC9Q8NEX5 89 aa17.78■□□□□ 0.44
TRAF4-211ENST00000478021 HARBI1Q96MB7 349 aa17.78■□□□□ 0.44
TRAF4-211ENST00000478021 FAM103A1Q9BTL3 118 aaKnown RBP17.78■□□□□ 0.44
TRAF4-211ENST00000478021 COMMD3Q9UBI1 195 aa17.78■□□□□ 0.44
TRAF4-211ENST00000478021 IGLV2-23P01705 113 aa17.77■□□□□ 0.44
TRAF4-211ENST00000478021 PRB2P02812 416 aaPredicted RBP17.77■□□□□ 0.44
TRAF4-211ENST00000478021 TAS2R20P59543 309 aa17.77■□□□□ 0.44
TRAF4-211ENST00000478021 RTL8BQ17RB0 113 aa17.77■□□□□ 0.44
TRAF4-211ENST00000478021 DEFB136Q30KP8 78 aa17.77■□□□□ 0.44
TRAF4-211ENST00000478021 PDLIM3Q53GG5 364 aaPredicted RBP17.77■□□□□ 0.44
TRAF4-211ENST00000478021 TMEM69Q5SWH9 247 aa17.77■□□□□ 0.44
TRAF4-211ENST00000478021 ANKRD13BQ86YJ7 626 aa17.77■□□□□ 0.44
TRAF4-211ENST00000478021 MRPL41Q8IXM3 137 aaKnown RBP17.77■□□□□ 0.44
TRAF4-211ENST00000478021 LINC00482Q8N8I6 264 aa17.77■□□□□ 0.44
TRAF4-211ENST00000478021 RNF152Q8N8N0 203 aa17.77■□□□□ 0.44
TRAF4-211ENST00000478021 DDB2Q92466 427 aa17.77■□□□□ 0.44
TRAF4-211ENST00000478021 KCTD12Q96CX2 325 aaKnown RBP17.77■□□□□ 0.44
TRAF4-211ENST00000478021 KLK15Q9H2R5 256 aa17.77■□□□□ 0.44
TRAF4-211ENST00000478021 A0A1W2PN81 502 aa17.76■□□□□ 0.43
TRAF4-211ENST00000478021 SHOXO15266 292 aa17.76■□□□□ 0.43
TRAF4-211ENST00000478021 GABARAPO95166 117 aa17.76■□□□□ 0.43
TRAF4-211ENST00000478021 EGR2P11161 476 aaPredicted RBP17.76■□□□□ 0.43
TRAF4-211ENST00000478021 CHRNA7P36544 502 aa17.76■□□□□ 0.43
TRAF4-211ENST00000478021 SNAPC3Q92966 411 aa17.76■□□□□ 0.43
TRAF4-211ENST00000478021 RAX2Q96IS3 184 aa17.76■□□□□ 0.43
TRAF4-211ENST00000478021 ADTRPQ96IZ2 230 aa17.76■□□□□ 0.43
TRAF4-211ENST00000478021 IFT46Q9NQC8 304 aa17.76■□□□□ 0.43
TRAF4-211ENST00000478021 TUSC2O75896 110 aa17.75■□□□□ 0.43
TRAF4-211ENST00000478021 CRYZL1O95825 349 aa17.75■□□□□ 0.43
TRAF4-211ENST00000478021 CBX5P45973 191 aa17.75■□□□□ 0.43
TRAF4-211ENST00000478021 TAGLNQ01995 201 aaKnown RBP17.75■□□□□ 0.43
TRAF4-211ENST00000478021 CTF1Q16619 201 aa17.75■□□□□ 0.43
TRAF4-211ENST00000478021 TMEM177Q53S58 311 aa17.75■□□□□ 0.43
TRAF4-211ENST00000478021 C19orf54Q5BKX5 351 aa17.75■□□□□ 0.43
TRAF4-211ENST00000478021 OR2B11Q5JQS5 317 aa17.75■□□□□ 0.43
TRAF4-211ENST00000478021 KPRPQ5T749 579 aaPredicted RBP17.75■□□□□ 0.43
TRAF4-211ENST00000478021 TMEM65Q6PI78 240 aa17.75■□□□□ 0.43
TRAF4-211ENST00000478021 PPP1R27Q86WC6 154 aa17.75■□□□□ 0.43
TRAF4-211ENST00000478021 CASTOR1Q8WTX7 329 aa17.75■□□□□ 0.43
TRAF4-211ENST00000478021 NECAP2Q9NVZ3 263 aa17.75■□□□□ 0.43
TRAF4-211ENST00000478021 RBMX2Q9Y388 322 aaKnown RBP17.75■□□□□ 0.43
TRAF4-211ENST00000478021 NOTCH3Q9UM47 2321 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 SRRM4A7MD48 611 aaKnown RBP17.74■□□□□ 0.43
TRAF4-211ENST00000478021 IGLV1-40P01703 118 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 IGLV2-14P01704 120 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 RRASP10301 218 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 AADACP22760 399 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms