RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 GPR107Q5VW38 600 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 MZT2AQ6P582 158 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 C10orf99Q6UWK7 81 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 HOGA1Q86XE5 327 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 AP3S1Q92572 193 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 RBMXL1Q96E39 390 aaKnown RBP11.77□□□□□ -0.53
ATG4B-213ENST00000460211 OR51J1Q9H342 316 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 IFT46Q9NQC8 304 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 COMMD3Q9UBI1 195 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 ZNF580Q9UK33 172 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 OR2W1Q9Y3N9 320 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 ADARB2-AS1A8MUL3 147 aa11.76□□□□□ -0.53
ATG4B-213ENST00000460211 G3V4G9 280 aa11.76□□□□□ -0.53
ATG4B-213ENST00000460211 J3QRK9 145 aa11.76□□□□□ -0.53
ATG4B-213ENST00000460211 SPDEFO95238 335 aa11.76□□□□□ -0.53
ATG4B-213ENST00000460211 PF4P02776 101 aa11.76□□□□□ -0.53
ATG4B-213ENST00000460211 ELANEP08246 267 aa11.76□□□□□ -0.53
ATG4B-213ENST00000460211 SLC6A1P30531 599 aa11.76□□□□□ -0.53
ATG4B-213ENST00000460211 LGALS7P47929 136 aa11.76□□□□□ -0.53
ATG4B-213ENST00000460211 RTL8BQ17RB0 113 aa11.76□□□□□ -0.53
ATG4B-213ENST00000460211 ZNF660Q6AZW8 331 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-213ENST00000460211 FBXL15Q9H469 300 aa11.76□□□□□ -0.53
ATG4B-213ENST00000460211 NECAP2Q9NVZ3 263 aa11.76□□□□□ -0.53
ATG4B-213ENST00000460211 NUDT19A8MXV4 375 aa11.75□□□□□ -0.53
ATG4B-213ENST00000460211 HLA-DQB1P01920 261 aa11.75□□□□□ -0.53
ATG4B-213ENST00000460211 APOA1P02647 267 aa11.75□□□□□ -0.53
ATG4B-213ENST00000460211 ALDH3B2P48448 385 aa11.75□□□□□ -0.53
ATG4B-213ENST00000460211 TAS2R20P59543 309 aa11.75□□□□□ -0.53
ATG4B-213ENST00000460211 RPL23AP62750 156 aaKnown RBP11.75□□□□□ -0.53
ATG4B-213ENST00000460211 FOXE3Q13461 319 aa11.75□□□□□ -0.53
ATG4B-213ENST00000460211 CTF1Q16619 201 aa11.75□□□□□ -0.53
ATG4B-213ENST00000460211 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
ATG4B-213ENST00000460211 GVQW1Q8N7I0 195 aa11.75□□□□□ -0.53
ATG4B-213ENST00000460211 PARP11Q9NR21 331 aa11.75□□□□□ -0.53
ATG4B-213ENST00000460211 METTL1Q9UBP6 276 aaKnown RBP11.75□□□□□ -0.53
ATG4B-213ENST00000460211 IGHV7-81A0A0B4J1V7 117 aa11.74□□□□□ -0.53
ATG4B-213ENST00000460211 IGKV1-16P04430 117 aa11.74□□□□□ -0.53
ATG4B-213ENST00000460211 ZNF182P17025 639 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-213ENST00000460211 PRSS3P35030 304 aa11.74□□□□□ -0.53
ATG4B-213ENST00000460211 LINC00205P59089 165 aa11.74□□□□□ -0.53
ATG4B-213ENST00000460211 TMEM267Q0VDI3 215 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-213ENST00000460211 PSG5Q15238 335 aa11.74□□□□□ -0.53
ATG4B-213ENST00000460211 ABHD5Q8WTS1 349 aa11.74□□□□□ -0.53
ATG4B-213ENST00000460211 NAA50Q9GZZ1 169 aaKnown RBP11.74□□□□□ -0.53
ATG4B-213ENST00000460211 MRPS7Q9Y2R9 242 aaKnown RBP11.74□□□□□ -0.53
ATG4B-213ENST00000460211 PRELID3BQ9Y3B1 194 aa11.74□□□□□ -0.53
ATG4B-213ENST00000460211 NBEAL2Q6ZNJ1 2754 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 TRAV41A0A0B4J266 112 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 SHOXO15266 292 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 ATP6V0E1O15342 81 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 IGHG4P01861 327 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 PTHLHP12272 177 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 CD33P20138 364 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 FCGR2CP31995 323 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 DUTP33316 252 aaKnown RBP11.73□□□□□ -0.53
ATG4B-213ENST00000460211 CX3CL1P78423 397 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 BEAN1Q3B7T3 259 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 TMEM65Q6PI78 240 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 ZNF562Q6V9R5 426 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 BVESQ8NE79 360 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 OR5AP2Q8NGF4 316 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 HARBI1Q96MB7 349 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 CLCC1Q96S66 551 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 RBMX2Q9Y388 322 aaKnown RBP11.73□□□□□ -0.53
ATG4B-213ENST00000460211 WSB1Q9Y6I7 421 aa11.73□□□□□ -0.53
ATG4B-213ENST00000460211 FAM25AB3EWG3 89 aa11.72□□□□□ -0.53
ATG4B-213ENST00000460211 FAM25CB3EWG5 89 aa11.72□□□□□ -0.53
ATG4B-213ENST00000460211 FAM25GB3EWG6 89 aa11.72□□□□□ -0.53
ATG4B-213ENST00000460211 SLC25A17O43808 307 aa11.72□□□□□ -0.53
ATG4B-213ENST00000460211 NOL3O60936 208 aaKnown RBP11.72□□□□□ -0.53
ATG4B-213ENST00000460211 TUSC2O75896 110 aa11.72□□□□□ -0.53
ATG4B-213ENST00000460211 EIF4EP06730 217 aaKnown RBP11.72□□□□□ -0.53
ATG4B-213ENST00000460211 FCER2P06734 321 aa11.72□□□□□ -0.53
ATG4B-213ENST00000460211 CDK10Q15131 360 aa11.72□□□□□ -0.53
ATG4B-213ENST00000460211 TMEM177Q53S58 311 aa11.72□□□□□ -0.53
ATG4B-213ENST00000460211 ZNF695Q8IW36 515 aa11.72□□□□□ -0.53
ATG4B-213ENST00000460211 TCTEX1D1Q8N7M0 179 aa11.72□□□□□ -0.53
ATG4B-213ENST00000460211 KLHL30-AS1Q8NEE0 82 aa11.72□□□□□ -0.53
ATG4B-213ENST00000460211 HSD17B10Q99714 261 aaKnown RBP11.72□□□□□ -0.53
ATG4B-213ENST00000460211 DCUN1D5Q9BTE7 237 aa11.72□□□□□ -0.53
ATG4B-213ENST00000460211 NOTCH3Q9UM47 2321 aa11.72□□□□□ -0.53
ATG4B-213ENST00000460211 MEIS3P1A6NDR6 274 aa11.71□□□□□ -0.53
ATG4B-213ENST00000460211 FCN1O00602 326 aa11.71□□□□□ -0.53
ATG4B-213ENST00000460211 HPGDSO60760 199 aa11.71□□□□□ -0.53
ATG4B-213ENST00000460211 CNIH1O95406 144 aa11.71□□□□□ -0.53
ATG4B-213ENST00000460211 RPLP1P05386 114 aaKnown RBP11.71□□□□□ -0.53
ATG4B-213ENST00000460211 CD40LGP29965 261 aa11.71□□□□□ -0.53
ATG4B-213ENST00000460211 RPL5P46777 297 aaKnown RBP11.71□□□□□ -0.53
ATG4B-213ENST00000460211 CDX1P47902 265 aaPredicted RBP11.71□□□□□ -0.53
ATG4B-213ENST00000460211 TAS2R46P59540 309 aa11.71□□□□□ -0.53
ATG4B-213ENST00000460211 CFHR3Q02985 330 aa11.71□□□□□ -0.53
ATG4B-213ENST00000460211 MSMO1Q15800 293 aa11.71□□□□□ -0.53
ATG4B-213ENST00000460211 VMA21Q3ZAQ7 101 aa11.71□□□□□ -0.53
ATG4B-213ENST00000460211 KCTD9Q7L273 389 aa11.71□□□□□ -0.53
ATG4B-213ENST00000460211 PPP1R27Q86WC6 154 aa11.71□□□□□ -0.53
ATG4B-213ENST00000460211 CLVS1Q8IUQ0 354 aaPredicted RBP11.71□□□□□ -0.53
ATG4B-213ENST00000460211 RNF152Q8N8N0 203 aa11.71□□□□□ -0.53
ATG4B-213ENST00000460211 ZBTB34Q8NCN2 500 aa11.71□□□□□ -0.53
ATG4B-213ENST00000460211 OSR1Q8TAX0 266 aaPredicted RBP11.71□□□□□ -0.53
ATG4B-213ENST00000460211 RAB2BQ8WUD1 216 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms