RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 BORCS5Q969J3 196 aa9.41□□□□□ -0.9
TRAPPC12-212ENST00000457845 ADTRPQ96IZ2 230 aa9.41□□□□□ -0.9
TRAPPC12-212ENST00000457845 EAF1Q96JC9 268 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC12-212ENST00000457845 RBM14Q96PK6 669 aaKnown RBP9.41□□□□□ -0.9
TRAPPC12-212ENST00000457845 SLC5A7Q9GZV3 580 aa9.41□□□□□ -0.9
TRAPPC12-212ENST00000457845 TNCP24821 2201 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 LINC00473A8K010 186 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 DISC1C4P0D8 188 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 CHST1O43916 411 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 OR2F2O95006 317 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 MOSP00540 346 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 IL7P13232 177 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 THBS3P49746 956 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 AP3S2P59780 193 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 SRSF2Q01130 221 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 FAAP20Q6NZ36 180 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 LPCAT3Q6P1A2 487 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 ZNF66Q6ZN08 573 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 DRAXINQ8NBI3 349 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 OR2T10Q8NGZ9 312 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 MRGPRFQ96AM1 343 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 HSD17B10Q99714 261 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 RNF5Q99942 180 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 RSRP1Q9BUV0 290 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 CCDC32Q9BV29 185 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 HRASLSQ9HDD0 168 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 RAB18Q9NP72 206 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 TNFRSF19Q9NS68 423 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 WASHC3Q9Y3C0 194 aa9.4□□□□□ -0.9
TRAPPC12-212ENST00000457845 FAM181BA6NEQ2 426 aa9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 AMY1AP04745 511 aa9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 FAUP35544 74 aaKnown RBP9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 BRWD1-AS2P59051 145 aa9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 RPL30P62888 115 aaKnown RBP9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 ZNF846Q147U1 533 aa9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 SURF2Q15527 256 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 TRIQKQ629K1 86 aa9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 TMEM219Q86XT9 240 aa9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 PDPNQ86YL7 162 aa9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 OR8H1Q8NGG4 311 aa9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 OR51S1Q8NGJ8 323 aa9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 OR13C8Q8NGS7 320 aa9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 PRRT1Q99946 306 aa9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 SLC25A33Q9BSK2 321 aa9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 WDR12Q9GZL7 423 aaKnown RBP9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 PLSCR3Q9NRY6 295 aa9.39□□□□□ -0.91
TRAPPC12-212ENST00000457845 GPR31O00270 319 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 FGF16O43320 207 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 TSPAN9O75954 239 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 RRASP10301 218 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 TMEM11P17152 192 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 ECI1P42126 302 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 HES1Q14469 280 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 KRTAP21-3Q3LHN1 58 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 KRTAP24-1Q3LI83 254 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 TMEM177Q53S58 311 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 SLC38A6Q8IZM9 456 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 NPBQ8NG41 125 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 RBMXL1Q96E39 390 aaKnown RBP9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 ZNF486Q96H40 463 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 RITA1Q96K30 269 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 RANBP3Q9H6Z4 567 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 SLC35D1Q9NTN3 355 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 C1RLQ9NZP8 487 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 SCP2D1Q9UJQ7 156 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 GPR132Q9UNW8 380 aa9.38□□□□□ -0.91
TRAPPC12-212ENST00000457845 NAP1L6A6NFF2 107 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 PLA2G10O15496 165 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 PGLYRP1O75594 196 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 NDUFA3O95167 84 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 NDUFA7O95182 113 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 APOA2P02652 100 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 IGKV1-16P04430 117 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 HKR1P10072 659 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 F2RL1P55085 397 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 RND3P61587 244 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 RELBQ01201 579 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 HNF4GQ14541 408 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 SCGB2B2Q4G0G5 96 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 ZNF57Q68EA5 555 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 C11orf88Q6PI97 169 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 IDO2Q6ZQW0 420 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 KCTD9Q7L273 389 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 CMTM1Q8IZ96 169 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 OR4C13Q8NGP0 309 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 MARCH1Q8TCQ1 289 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 GPHA2Q96T91 129 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 C7orf50Q9BRJ6 194 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 MOB4Q9Y3A3 225 aa9.37□□□□□ -0.91
TRAPPC12-212ENST00000457845 H7C2Y5 167 aa9.36□□□□□ -0.91
TRAPPC12-212ENST00000457845 M0QZK8 103 aa9.36□□□□□ -0.91
TRAPPC12-212ENST00000457845 RBFOX2O43251 390 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRAPPC12-212ENST00000457845 TNFSF12O43508 249 aa9.36□□□□□ -0.91
TRAPPC12-212ENST00000457845 CTSDP07339 412 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-212ENST00000457845 CATR1Q13166 79 aa9.36□□□□□ -0.91
TRAPPC12-212ENST00000457845 RTL8BQ17RB0 113 aa9.36□□□□□ -0.91
TRAPPC12-212ENST00000457845 DHRS7BQ6IAN0 325 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-212ENST00000457845 Q6ZSV7 163 aa9.36□□□□□ -0.91
TRAPPC12-212ENST00000457845 Q8N2B8 174 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms