RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 LOC102724200A0A096LPH7 203 aaPredicted RBP12.81□□□□□ -0.36
UBE2D4-209ENST00000454428 A0A0B4J203 849 aa12.81□□□□□ -0.36
UBE2D4-209ENST00000454428 OGG1O15527 345 aa12.81□□□□□ -0.36
UBE2D4-209ENST00000454428 NAPSAO96009 420 aa12.81□□□□□ -0.36
UBE2D4-209ENST00000454428 LALBAP00709 142 aa12.81□□□□□ -0.36
UBE2D4-209ENST00000454428 LGALS7P47929 136 aa12.81□□□□□ -0.36
UBE2D4-209ENST00000454428 ZIK1Q3SY52 487 aaPredicted RBP12.81□□□□□ -0.36
UBE2D4-209ENST00000454428 OR2G6Q5TZ20 316 aa12.81□□□□□ -0.36
UBE2D4-209ENST00000454428 PDPNQ86YL7 162 aa12.81□□□□□ -0.36
UBE2D4-209ENST00000454428 KCNG3Q8TAE7 436 aa12.81□□□□□ -0.36
UBE2D4-209ENST00000454428 FAM46BQ96A09 425 aa12.81□□□□□ -0.36
UBE2D4-209ENST00000454428 SMIM19Q96E16 107 aa12.81□□□□□ -0.36
UBE2D4-209ENST00000454428 FAAP24Q9BTP7 215 aa12.81□□□□□ -0.36
UBE2D4-209ENST00000454428 TRBV5-7A0A0A0MS05 114 aa12.8□□□□□ -0.36
UBE2D4-209ENST00000454428 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.8□□□□□ -0.36
UBE2D4-209ENST00000454428 PRH1P02810 166 aa12.8□□□□□ -0.36
UBE2D4-209ENST00000454428 ATF4P18848 351 aaPredicted RBP12.8□□□□□ -0.36
UBE2D4-209ENST00000454428 ETV1P50549 477 aa12.8□□□□□ -0.36
UBE2D4-209ENST00000454428 EXOSC2Q13868 293 aaKnown RBP12.8□□□□□ -0.36
UBE2D4-209ENST00000454428 TMEM61Q8N0U2 210 aa12.8□□□□□ -0.36
UBE2D4-209ENST00000454428 CACNG8Q8WXS5 425 aa12.8□□□□□ -0.36
UBE2D4-209ENST00000454428 KCTD12Q96CX2 325 aaKnown RBP12.8□□□□□ -0.36
UBE2D4-209ENST00000454428 TECRQ9NZ01 308 aaKnown RBP12.8□□□□□ -0.36
UBE2D4-209ENST00000454428 MUC4Q99102 2169 aa12.8□□□□□ -0.36
UBE2D4-209ENST00000454428 TRBV9A0A0B4J1U6 114 aa12.79□□□□□ -0.36
UBE2D4-209ENST00000454428 A0A1W2PPK0 400 aa12.79□□□□□ -0.36
UBE2D4-209ENST00000454428 SRRM4A7MD48 611 aaKnown RBP12.79□□□□□ -0.36
UBE2D4-209ENST00000454428 NDUFB8O95169 186 aa12.79□□□□□ -0.36
UBE2D4-209ENST00000454428 HLA-AP01891 365 aaKnown RBP12.79□□□□□ -0.36
UBE2D4-209ENST00000454428 FCGR1AP12314 374 aa12.79□□□□□ -0.36
UBE2D4-209ENST00000454428 RHOGP84095 191 aa12.79□□□□□ -0.36
UBE2D4-209ENST00000454428 SLC16A13Q7RTY0 426 aa12.79□□□□□ -0.36
UBE2D4-209ENST00000454428 C6orf201Q7Z4U5 140 aa12.79□□□□□ -0.36
UBE2D4-209ENST00000454428 RHOXF1Q8NHV9 184 aa12.79□□□□□ -0.36
UBE2D4-209ENST00000454428 PHLDA1Q8WV24 401 aaPredicted RBP12.79□□□□□ -0.36
UBE2D4-209ENST00000454428 PTX4Q96A99 478 aa12.79□□□□□ -0.36
UBE2D4-209ENST00000454428 TP53TG1Q9Y2A0 90 aa12.79□□□□□ -0.36
UBE2D4-209ENST00000454428 PPP5D1E7EU14 171 aa12.78□□□□□ -0.36
UBE2D4-209ENST00000454428 EI24O14681 340 aa12.78□□□□□ -0.36
UBE2D4-209ENST00000454428 OR9G9P0C7N8 305 aa12.78□□□□□ -0.36
UBE2D4-209ENST00000454428 BMI1P35226 326 aa12.78□□□□□ -0.36
UBE2D4-209ENST00000454428 CAPGP40121 348 aa12.78□□□□□ -0.36
UBE2D4-209ENST00000454428 CEACAM6P40199 344 aa12.78□□□□□ -0.36
UBE2D4-209ENST00000454428 Q499Y3 187 aa12.78□□□□□ -0.36
UBE2D4-209ENST00000454428 CDH26Q8IXH8 852 aa12.78□□□□□ -0.36
UBE2D4-209ENST00000454428 APH1BQ8WW43 257 aa12.78□□□□□ -0.36
UBE2D4-209ENST00000454428 PGLYRP3Q96LB9 341 aa12.78□□□□□ -0.36
UBE2D4-209ENST00000454428 FGF20Q9NP95 211 aaPredicted RBP12.78□□□□□ -0.36
UBE2D4-209ENST00000454428 CKLFQ9UBR5 152 aa12.78□□□□□ -0.36
UBE2D4-209ENST00000454428 MLXQ9UH92 298 aa12.78□□□□□ -0.36
UBE2D4-209ENST00000454428 FAM223BA6NKX1 122 aa12.77□□□□□ -0.37
UBE2D4-209ENST00000454428 SPRY2O43597 315 aa12.77□□□□□ -0.37
UBE2D4-209ENST00000454428 CBLN1P23435 193 aa12.77□□□□□ -0.37
UBE2D4-209ENST00000454428 DEFB135Q30KP9 77 aa12.77□□□□□ -0.37
UBE2D4-209ENST00000454428 OR10K2Q6IF99 312 aa12.77□□□□□ -0.37
UBE2D4-209ENST00000454428 Q6ZWC4 215 aa12.77□□□□□ -0.37
UBE2D4-209ENST00000454428 FAM223AQ8IWN6 122 aa12.77□□□□□ -0.37
UBE2D4-209ENST00000454428 SLC35D1Q9NTN3 355 aa12.77□□□□□ -0.37
UBE2D4-209ENST00000454428 LGALS9O00182 355 aa12.76□□□□□ -0.37
UBE2D4-209ENST00000454428 APOA2P02652 100 aa12.76□□□□□ -0.37
UBE2D4-209ENST00000454428 HTR2CP28335 458 aa12.76□□□□□ -0.37
UBE2D4-209ENST00000454428 ATP5G2Q06055 141 aa12.76□□□□□ -0.37
UBE2D4-209ENST00000454428 OR52B4Q8NGK2 314 aa12.76□□□□□ -0.37
UBE2D4-209ENST00000454428 EDARADDQ8WWZ3 215 aa12.76□□□□□ -0.37
UBE2D4-209ENST00000454428 NEDD4LQ96PU5 975 aa12.76□□□□□ -0.37
UBE2D4-209ENST00000454428 BABAM2Q9NXR7 383 aa12.76□□□□□ -0.37
UBE2D4-209ENST00000454428 TRBV6-6A0A0A6YYG2 114 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 IGKV1-6A0A0C4DH72 117 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 TMEM213A2RRL7 107 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 M0R1X1 148 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 ATP8B1O43520 1251 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 OR2C1O95371 312 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 ZBTB25P24278 435 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 TM4SF20Q53R12 229 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 YIF1BQ5BJH7 314 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 ZFP41Q8N8Y5 198 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 SETD6Q8TBK2 473 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 C5orf30Q96GV9 206 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 HARBI1Q96MB7 349 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 Q96MT0 163 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 PHB2Q99623 299 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 NICN1Q9BSH3 213 aa12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 HDHD3Q9BSH5 251 aaPredicted RBP12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 RPL36Q9Y3U8 105 aaKnown RBP12.75□□□□□ -0.37
UBE2D4-209ENST00000454428 A0A1B0GVY2 172 aa12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 DYNC1I1O14576 645 aa12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 SCAF4O95104 1147 aaKnown RBP12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 SCTP09683 121 aa12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 RPS27AP62979 156 aaKnown RBP12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 HLA-DRB3P79483 266 aa12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 SMN1Q16637 294 aaKnown RBP12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 TMEM177Q53S58 311 aa12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 ZNF57Q68EA5 555 aaPredicted RBP12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 MOB1BQ7L9L4 216 aa12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 RNF183Q96D59 192 aa12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 DERL3Q96Q80 235 aa12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 UQCC2Q9BRT2 126 aa12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 KRTAP4-5Q9BYR2 181 aa12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 KCNK15Q9H427 330 aa12.74□□□□□ -0.37
UBE2D4-209ENST00000454428 CLEC2DQ9UHP7 191 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms