RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 LTC4SQ16873 150 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 IGSF11Q5DX21 431 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 CT45A1Q5HYN5 189 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 ATAD3CQ5T2N8 411 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 PLCXD3Q63HM9 321 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 Q6P435 159 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 TRPM8Q7Z2W7 1104 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 ENTHD1Q8IYW4 607 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 ZBTB8BQ8NAP8 495 aaPredicted RBP3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 OR51T1Q8NGJ9 327 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 CT45A3Q8NHU0 189 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 SETD6Q8TBK2 473 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 ACMSDQ8TDX5 336 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 RNF133Q8WVZ7 376 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 GTF2H4Q92759 462 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 NIPSNAP3BQ9BS92 247 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 SPXQ9BT56 116 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 RBFOX1Q9NWB1 397 aaKnown RBP3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 NINJ2Q9NZG7 142 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 DNAJC27Q9NZQ0 273 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 MRPL27Q9P0M9 148 aaKnown RBP3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 RHCGQ9UBD6 479 aa3.46□□□□□ -1.86
SBDSP1-204ENST00000453858 TRAV34A0A0B4J273 112 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 OR4C46A6NHA9 309 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 C15orf65H3BRN8 121 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 ZNF593O00488 134 aaPredicted RBP3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 DYNC1I1O14576 645 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 APOC1P02654 83 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 HTN3P15516 51 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 MAS1LP35410 378 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 TFPI2P48307 235 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 RHOGP84095 191 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 RIPPLY1Q0D2K3 151 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 TMEM41BQ5BJD5 291 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 CST9LP1Q5W188 147 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 DPY19L2P2Q6ZN68 376 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 ASRGL1Q7L266 308 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 FAM58AQ8N1B3 248 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 OR52M1Q8NGK5 317 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 CIRBP-AS1Q8TBR5 109 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 SLAMF9Q96A28 289 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 TAMM41Q96BW9 452 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 C16orf45Q96MC5 204 aaPredicted RBP3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 UHRF2Q96PU4 802 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 AMELYQ99218 206 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 CHAC1Q9BUX1 264 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 POLR2J2Q9GZM3 115 aaKnown RBP3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 NSRP1Q9H0G5 558 aaKnown RBP3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 POLR2J3Q9H1A7 115 aaKnown RBP3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 REEP1Q9H902 201 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 RPRD1BQ9NQG5 326 aaKnown RBP3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 TMEM14BQ9NUH8 114 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 CLEC5AQ9NY25 188 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 CD300AQ9UGN4 299 aa3.45□□□□□ -1.86
SBDSP1-204ENST00000453858 TRAV39A0A0B4J263 110 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 TRBV2A0A0J9YWF9 115 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 A0A0U1RQV5 110 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 SLC33A1O00400 549 aaPredicted RBP3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 MRPS14O60783 128 aaKnown RBP3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 CA2P00918 260 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 IGLV2-8P01709 118 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 IL6P05231 212 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 CALCBP10092 127 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 HIST1H1CP16403 213 aaKnown RBP3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 GPX2P18283 190 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 PYCR1P32322 319 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 MAP2K4P45985 399 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 CMC4P56277 68 aaPredicted RBP3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 TAS2R41P59536 307 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 PAX5Q02548 391 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 ATP5G2Q06055 141 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 SCN1BQ07699 218 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 ARL16Q0P5N6 197 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 BNIP1Q12981 228 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 PLA2G7Q13093 441 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 CALCOCO2Q13137 446 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 CBX3Q13185 183 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 EXOSC2Q13868 293 aaKnown RBP3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 FXYD3Q14802 87 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 ESRGQ1W209 222 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 Q3ZCU0 254 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 CCDC153Q494R4 210 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 SPIN3Q5JUX0 258 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 ZNF684Q5T5D7 378 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 OR4A47Q6IF82 309 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 TBPL2Q6SJ96 375 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 BBS1Q8NFJ9 593 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 GHSRQ92847 366 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 FAM46BQ96A09 425 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 SGK494Q96LW2 274 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 KAT8Q9H7Z6 458 aaKnown RBP3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 HMG20AQ9NP66 347 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 INTS9Q9NV88 658 aaKnown RBP3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 KIF25Q9UIL4 384 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 ETV7Q9Y603 341 aa3.44□□□□□ -1.86
SBDSP1-204ENST00000453858 FAM223BA6NKX1 122 aa3.43□□□□□ -1.86
SBDSP1-204ENST00000453858 SH2D1BO14796 132 aa3.43□□□□□ -1.86
SBDSP1-204ENST00000453858 ARPC3O15145 178 aa3.43□□□□□ -1.86
SBDSP1-204ENST00000453858 ANP32DO95626 131 aa3.43□□□□□ -1.86
SBDSP1-204ENST00000453858 IGLV2-11P01706 119 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms