RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	METTL1	Q9UBP6	276 aa	Known RBP	12.37	□□□□□ -0.43
HDLBP-223	ENST00000449864	A3GALT2	U3KPV4	340 aa		12.37	□□□□□ -0.43
HDLBP-223	ENST00000449864	IGKV1D-8	A0A087WSZ0	117 aa		12.36	□□□□□ -0.43
HDLBP-223	ENST00000449864	CCL24	O00175	119 aa		12.36	□□□□□ -0.43
HDLBP-223	ENST00000449864	IGKV1-16	P04430	117 aa		12.36	□□□□□ -0.43
HDLBP-223	ENST00000449864	PSMB8	P28062	276 aa		12.36	□□□□□ -0.43
HDLBP-223	ENST00000449864	PSG5	Q15238	335 aa		12.36	□□□□□ -0.43
HDLBP-223	ENST00000449864	ZNF660	Q6AZW8	331 aa	Predicted RBP	12.36	□□□□□ -0.43
HDLBP-223	ENST00000449864	C4orf3	Q8WVX3	66 aa		12.36	□□□□□ -0.43
HDLBP-223	ENST00000449864	FLYWCH2	Q96CP2	140 aa	Known RBP	12.36	□□□□□ -0.43
HDLBP-223	ENST00000449864	CLCC1	Q96S66	551 aa		12.36	□□□□□ -0.43
HDLBP-223	ENST00000449864	MCRIP2	Q9BUT9	160 aa	Known RBP	12.36	□□□□□ -0.43
HDLBP-223	ENST00000449864	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	12.36	□□□□□ -0.43
HDLBP-223	ENST00000449864	SDHAF2	Q9NX18	166 aa		12.36	□□□□□ -0.43
HDLBP-223	ENST00000449864		A0A1W2PN81	502 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	SLC25A17	O43808	307 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	AIRE	O43918	545 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	CHRNA7	P36544	502 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	LINC00205	P59089	165 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	CX3CL1	P78423	397 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	NDP	Q00604	133 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	RTL8B	Q17RB0	113 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	ZNF260	Q3ZCT1	412 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	OR5H6	Q8NGV6	325 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	MRAP	Q8TCY5	172 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	SLC25A38	Q96DW6	304 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	P2RX4	Q99571	388 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	DCSTAMP	Q9H295	470 aa		12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	FOXA2	Q9Y261	457 aa	Predicted RBP	12.35	□□□□□ -0.43
HDLBP-223	ENST00000449864	CA2	P00918	260 aa		12.34	□□□□□ -0.43
HDLBP-223	ENST00000449864	CTXN2	P0C2S0	81 aa		12.34	□□□□□ -0.43
HDLBP-223	ENST00000449864	PPIF	P30405	207 aa	Known RBP	12.34	□□□□□ -0.43
HDLBP-223	ENST00000449864	TCTEX1D1	Q8N7M0	179 aa		12.34	□□□□□ -0.43
HDLBP-223	ENST00000449864	HARBI1	Q96MB7	349 aa		12.34	□□□□□ -0.43
HDLBP-223	ENST00000449864	GAB2	Q9UQC2	676 aa		12.34	□□□□□ -0.43
HDLBP-223	ENST00000449864	FBXO7	Q9Y3I1	522 aa		12.34	□□□□□ -0.43
HDLBP-223	ENST00000449864	TRAV18	A0A075B6X5	111 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864		J3QRK9	145 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	FCN1	O00602	326 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	SSX5	O60225	188 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	IGLV1-40	P01703	118 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	HOXD3	P31249	432 aa	Predicted RBP	12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	TGFBR1	P36897	503 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	CRIP2	P52943	208 aa	Predicted RBP	12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	LSM3	P62310	102 aa	Known RBP	12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	TAGLN	Q01995	201 aa	Known RBP	12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	UNQ5815/PRO19632	Q6UWF5	114 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	PPP1R27	Q86WC6	154 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	CROCCP3	Q8IVE0	287 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	BVES	Q8NE79	360 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	OR5M8	Q8NGP6	311 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	GRPEL2	Q8TAA5	225 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	ARPC1A	Q92747	370 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	YIPF6	Q96EC8	236 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	ADTRP	Q96IZ2	230 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	UBE2E2	Q96LR5	201 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	FAM103A1	Q9BTL3	118 aa	Known RBP	12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	KLK15	Q9H2R5	256 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	DIABLO	Q9NR28	239 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	TPSG1	Q9NRR2	321 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864	VSIG4	Q9Y279	399 aa		12.33	□□□□□ -0.44
HDLBP-223	ENST00000449864		A0A0A6YYH2	397 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864		A6NJ64	397 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	SHOX	O15266	292 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	TMEM127	O75204	238 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	RRAS	P10301	218 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	NFYA	P23511	347 aa	Predicted RBP	12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	LUM	P51884	338 aa	Predicted RBP	12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	ARPC4	P59998	168 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	GNB1	P62873	340 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	ACTBL2	Q562R1	376 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	CNIH2	Q6PI25	160 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	ZNF562	Q6V9R5	426 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	MINDY2	Q8NBR6	621 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	MYOZ3	Q8TDC0	251 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	C5orf30	Q96GV9	206 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	OR5B12	Q96R08	314 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	ANXA10	Q9UJ72	324 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	SPATA2	Q9UM82	520 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	OR2W1	Q9Y3N9	320 aa		12.32	□□□□□ -0.44
HDLBP-223	ENST00000449864	CNIH1	O95406	144 aa		12.31	□□□□□ -0.44
HDLBP-223	ENST00000449864	CD40LG	P29965	261 aa		12.31	□□□□□ -0.44
HDLBP-223	ENST00000449864	LGALS7	P47929	136 aa		12.31	□□□□□ -0.44
HDLBP-223	ENST00000449864	RAB9A	P51151	201 aa		12.31	□□□□□ -0.44
HDLBP-223	ENST00000449864	C19orf54	Q5BKX5	351 aa		12.31	□□□□□ -0.44
HDLBP-223	ENST00000449864	PYHIN1	Q6K0P9	492 aa		12.31	□□□□□ -0.44
HDLBP-223	ENST00000449864	ZNF645	Q8N7E2	425 aa		12.31	□□□□□ -0.44
HDLBP-223	ENST00000449864	ZNF491	Q8N8L2	437 aa		12.31	□□□□□ -0.44
HDLBP-223	ENST00000449864	BEST4	Q8NFU0	473 aa		12.31	□□□□□ -0.44
HDLBP-223	ENST00000449864	GNB4	Q9HAV0	340 aa		12.31	□□□□□ -0.44
HDLBP-223	ENST00000449864	SOX15	O60248	233 aa		12.3	□□□□□ -0.44
HDLBP-223	ENST00000449864	CRYZL1	O95825	349 aa		12.3	□□□□□ -0.44
HDLBP-223	ENST00000449864	DUT	P33316	252 aa	Known RBP	12.3	□□□□□ -0.44
HDLBP-223	ENST00000449864	FXYD3	Q14802	87 aa		12.3	□□□□□ -0.44
HDLBP-223	ENST00000449864	AKIRIN2	Q53H80	203 aa		12.3	□□□□□ -0.44
HDLBP-223	ENST00000449864	TMEM177	Q53S58	311 aa		12.3	□□□□□ -0.44
HDLBP-223	ENST00000449864	KCTD9	Q7L273	389 aa		12.3	□□□□□ -0.44
HDLBP-223	ENST00000449864	LFNG	Q8NES3	379 aa		12.3	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms