RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 RHBDD1Q8TEB9 315 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 SPACA9Q96E40 222 aaPredicted RBP8.88□□□□□ -0.99
LIN54-202ENST00000442461 CSTL1Q9H114 145 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 GNB4Q9HAV0 340 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 GPR35Q9HC97 309 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 MRPL16Q9NX20 251 aaKnown RBP8.88□□□□□ -0.99
LIN54-202ENST00000442461 GAGE2DQ9UEU5 116 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 TAF1P21675 1872 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 A0A0U1RQV5 110 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 CXCL13O43927 109 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 HYPMO75409 117 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 DXOO77932 396 aaKnown RBP8.88□□□□□ -0.99
LIN54-202ENST00000442461 APOMO95445 188 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 SCTP09683 121 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 GCHFRP30047 84 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 KIR2DS2P43631 304 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 OR1D5P58170 312 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 UNQ6494/PRO21346Q6UXR6 183 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 GRAMD2BQ96HH9 432 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 PGLYRP4Q96LB8 373 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 ARAP2Q8WZ64 1704 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 IGHV2OR16-5A0A0B4J2B6 119 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 KBTBD11-OT1A0A1B0GTJ5 212 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 DEFB108AA8MXU0 73 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 PRRT4C9JH25 899 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 PAXXQ9BUH6 204 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 CHTOPQ9Y3Y2 248 aaKnown RBP8.88□□□□□ -0.99
LIN54-202ENST00000442461 SCN8AQ9UQD0 1980 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 A0A1W2PPV9 198 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 M0R3E3 92 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 IGLC2P0DOY2 106 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 IGLC3P0DOY3 106 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 NOGQ13253 232 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 TWIST1Q15672 202 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 HES3Q5TGS1 186 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 ZNF525Q8N782 197 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 Q96M66 194 aa8.88□□□□□ -0.99
LIN54-202ENST00000442461 NAA38Q9BRA0 125 aaKnown RBP8.88□□□□□ -0.99
LIN54-202ENST00000442461 NHP2Q9NX24 153 aaKnown RBP8.88□□□□□ -0.99
LIN54-202ENST00000442461 MUC21A0A0G2JKD1 596 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 MUC21A0A140T8X8 626 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 NRG2O14511 850 aaPredicted RBP8.87□□□□□ -0.99
LIN54-202ENST00000442461 GPX1P07203 203 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 UCP1P25874 307 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 S100A4P26447 101 aaKnown RBP8.87□□□□□ -0.99
LIN54-202ENST00000442461 UCP2P55851 309 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 GAGE13Q4V321 117 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 MUC21Q5SSG8 566 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 C10orf113Q5VZT2 155 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 LCN12Q6JVE5 192 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 SCN3AQ9NY46 2000 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 ATP23Q9Y6H3 246 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 ZNFX1Q9P2E3 1918 aaKnown RBP8.87□□□□□ -0.99
LIN54-202ENST00000442461 A0A1B0GW15 77 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 PGPEP1LA6NFU8 196 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 MC5RP33032 325 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 FOLR3P41439 243 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 FAM78AQ5JUQ0 283 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 STPG4Q8N801 248 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 PERPQ96FX8 193 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 SEPSECSQ9HD40 501 aaKnown RBP8.87□□□□□ -0.99
LIN54-202ENST00000442461 AMMECR1Q9Y4X0 333 aaPredicted RBP8.87□□□□□ -0.99
LIN54-202ENST00000442461 TNRC6CQ9HCJ0 1690 aaKnown RBP8.87□□□□□ -0.99
LIN54-202ENST00000442461 SCO2A0A1W2PP80 73 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 SCRG1O75711 98 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 NAPSAO96009 420 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 LYL1P12980 280 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 CKS2P33552 79 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 RAB9AP51151 201 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 ZNF502Q8TBZ5 544 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 MRGPRX1Q96LB2 322 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 ZNF355PQ9NSJ1 428 aa8.87□□□□□ -0.99
LIN54-202ENST00000442461 A0A1W2PQD3 144 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 LIPT2A6NK58 231 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 KCNMB1Q16558 191 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 YRDCQ86U90 279 aaKnown RBP8.86□□□□□ -0.99
LIN54-202ENST00000442461 GLRX2Q9NS18 164 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 CFIP05156 583 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 PFN1P07737 140 aaKnown RBP8.86□□□□□ -0.99
LIN54-202ENST00000442461 CD40P25942 277 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 SUPT4H1P63272 117 aaKnown RBP8.86□□□□□ -0.99
LIN54-202ENST00000442461 TMEM177Q53S58 311 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 ZNF818PQ6ZRF7 136 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 FBLN5Q9UBX5 448 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 RGPD5Q99666 1765 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 LOC105371242A0A075B767 164 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 IGHV3-43A0A0B4J1X8 118 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 PPIAL4CA0A0B4J2A2 164 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 IZUMO1RA6ND01 250 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 SHISA7A6NL88 538 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 IL6RP08887 468 aaPredicted RBP8.86□□□□□ -0.99
LIN54-202ENST00000442461 PPIAL4GP0DN37 164 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 IGHV3-43DP0DP04 118 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 RPS19BP1Q86WX3 136 aaKnown RBP8.86□□□□□ -0.99
LIN54-202ENST00000442461 NPCDR1Q9BY65 106 aa8.86□□□□□ -0.99
LIN54-202ENST00000442461 TRAV8-2A0A0B4J237 113 aa8.85□□□□□ -0.99
LIN54-202ENST00000442461 TRAV8-6A0A0B4J262 113 aa8.85□□□□□ -0.99
LIN54-202ENST00000442461 OR11H12B2RN74 326 aa8.85□□□□□ -0.99
LIN54-202ENST00000442461 CCL25O15444 150 aa8.85□□□□□ -0.99
LIN54-202ENST00000442461 TSPAN13O95857 204 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms