RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 LY86O95711 162 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 HSPB1P04792 205 aaKnown RBP8.66□□□□□ -1.02
CPNE1-218ENST00000439806 SRP19P09132 144 aaKnown RBP8.66□□□□□ -1.02
CPNE1-218ENST00000439806 ELLP55199 621 aaPredicted RBP8.66□□□□□ -1.02
CPNE1-218ENST00000439806 BRWD1-AS2P59051 145 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 RBPJQ06330 500 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 ICAM4Q14773 271 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 RHEBQ15382 184 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 NCR3LG1Q68D85 454 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 SSX8Q7RTT4 187 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 OR10P1Q8NGE3 313 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 Q8TCH9 128 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 RXFP4Q8TDU9 374 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 TAF15Q92804 592 aaKnown RBP eCLIP8.66□□□□□ -1.021e-6■□□□□ 9.7
CPNE1-218ENST00000439806 PINX1Q96BK5 328 aaKnown RBP8.66□□□□□ -1.02
CPNE1-218ENST00000439806 SDSLQ96GA7 329 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 DIRC2Q96SL1 478 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 S1PR3Q99500 378 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 FAM234AQ9H0X4 552 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 GFOD1Q9NXC2 390 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 CACNA1HO95180 2353 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 DSCAMO60469 2012 aa8.66□□□□□ -1.02
CPNE1-218ENST00000439806 LOC102723971A0A1B0GUV8 181 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 ZNF729A6NN14 1252 aaPredicted RBP8.65□□□□□ -1.02
CPNE1-218ENST00000439806 MARCH11A6NNE9 402 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 FAM90A9PA6NNJ1 464 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 VSTM5A8MXK1 200 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 RBFOX2O43251 390 aaKnown RBP eCLIP8.65□□□□□ -1.023e-14■■■■■ 31.7
CPNE1-218ENST00000439806 IFNA1P01562 189 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 SELLP14151 372 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 TNFRSF1AP19438 455 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 FGF7P21781 194 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 AKR1C3P42330 323 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 CEBPGP53567 150 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 RPP30P78346 268 aaKnown RBP8.65□□□□□ -1.02
CPNE1-218ENST00000439806 C17orf58Q2M2W7 97 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 TMEM30BQ3MIR4 351 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 KHDC3LQ587J8 217 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 RPL39P5Q59GN2 51 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 STUMQ69YW2 141 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 Q8NA96 180 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.65□□□□□ -1.02
CPNE1-218ENST00000439806 DEFB108BQ8NET1 73 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 OR4A16Q8NH70 328 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 CLDND2Q8NHS1 167 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 ZDHHC16Q969W1 377 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 GAFA1Q96PS6 74 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 AGMATQ9BSE5 352 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 C20orf24Q9BUV8 137 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 QTRT1Q9BXR0 403 aaKnown RBP8.65□□□□□ -1.02
CPNE1-218ENST00000439806 GCM1Q9NP62 436 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 RPRMQ9NS64 109 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 IDI2-AS1Q9NZ38 188 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 GAB2Q9UQC2 676 aa8.65□□□□□ -1.02
CPNE1-218ENST00000439806 PUS1Q9Y606 427 aaKnown RBP eCLIP8.65□□□□□ -1.02
CPNE1-218ENST00000439806 DIDO1Q9BTC0 2240 aaKnown RBP8.65□□□□□ -1.03
CPNE1-218ENST00000439806 KBTBD11-OT1A0A1B0GTJ5 212 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 MAP1LC3B2A6NCE7 125 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 TSPAN9O75954 239 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 IFNA17P01571 189 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 IGHV3-7P01780 117 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 GYPAP02724 150 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 OR9G9P0C7N8 305 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 PAX6P26367 422 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 THBS3P49746 956 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 LOXL3P58215 753 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 LINC00205P59089 165 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 OR2B8PP59922 312 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 SPINK9Q5DT21 86 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 LCN15Q6UWW0 184 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 ETV3LQ6ZN32 361 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 C22orf34Q6ZV56 151 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 SSX9Q7RTT3 188 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 ZNF709Q8N972 641 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 OR4S2Q8NH73 311 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 MBD3L1Q8WWY6 194 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 ADTRPQ96IZ2 230 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 CCL13Q99616 98 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 MAP1LC3BQ9GZQ8 125 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 HIPK2Q9H2X6 1198 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 IFI27L2Q9H2X8 130 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 VSIRQ9H7M9 311 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 GNG13Q9P2W3 67 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 ZNF835Q9Y2P0 537 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 VCANP13611 3396 aa8.64□□□□□ -1.03
CPNE1-218ENST00000439806 BDP1A6H8Y1 2624 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 DPRXA6NFQ7 191 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 ZFP92A6NM28 416 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 PMS2P5A8MQ11 134 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 C17orf112F2Z3M2 114 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 K7ENP7 123 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 SLC31A2O15432 143 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 MBP02144 154 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 CD55P08174 381 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 OR4A8P0C604 315 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 CGB3P0DN86 165 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 CGB7P0DN87 165 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 NQO2P16083 231 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 FGF8P55075 233 aaPredicted RBP8.63□□□□□ -1.03
CPNE1-218ENST00000439806 SPCS3P61009 180 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms