RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 SPNP16150 400 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 GNB3P16520 340 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 RPS16P62249 146 aaKnown RBP13.15□□□□□ -0.3
CPSF4-203ENST00000430038 ACTBL2Q562R1 376 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 HAPLN4Q86UW8 402 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 SBSPONQ8IVN8 264 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 OR56B1Q8NGI3 324 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 ABHD5Q8WTS1 349 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 EDARADDQ8WWZ3 215 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 RNF5Q99942 180 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 GHITMQ9H3K2 345 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 M0R1X1 148 aa13.14□□□□□ -0.31
CPSF4-203ENST00000430038 RBMXL2O75526 392 aaKnown RBP13.14□□□□□ -0.31
CPSF4-203ENST00000430038 FCGR3AP08637 254 aa13.14□□□□□ -0.31
CPSF4-203ENST00000430038 OR8U9P0C7N5 309 aa13.14□□□□□ -0.31
CPSF4-203ENST00000430038 INSL3P51460 131 aa13.14□□□□□ -0.31
CPSF4-203ENST00000430038 DEFA5Q01523 94 aa13.14□□□□□ -0.31
CPSF4-203ENST00000430038 ACSM6Q6P461 480 aa13.14□□□□□ -0.31
CPSF4-203ENST00000430038 ARPC1AQ92747 370 aa13.14□□□□□ -0.31
CPSF4-203ENST00000430038 ACOT13Q9NPJ3 140 aa13.14□□□□□ -0.31
CPSF4-203ENST00000430038 SDHAF2Q9NX18 166 aa13.14□□□□□ -0.31
CPSF4-203ENST00000430038 RAB22AQ9UL26 194 aa13.14□□□□□ -0.31
CPSF4-203ENST00000430038 TRBV6-7A0A0A0MS04 114 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 SMIM30A4D0T7 59 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 MFNGO00587 321 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 BET1O15155 118 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 FABP7O15540 132 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 SAP30O75446 220 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 LY86O95711 162 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 TFAP2AP05549 437 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 PSMA1P25786 263 aaKnown RBP13.13□□□□□ -0.31
CPSF4-203ENST00000430038 DCTN2Q13561 401 aaKnown RBP13.13□□□□□ -0.31
CPSF4-203ENST00000430038 FXYD3Q14802 87 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 TBCEQ15813 527 aaPredicted RBP13.13□□□□□ -0.31
CPSF4-203ENST00000430038 IZUMO2Q6UXV1 221 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 OVCH2Q7RTZ1 564 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 ZNF429Q86V71 674 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 TCTEX1D1Q8N7M0 179 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 OR5T1Q8NG75 326 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 OR4A4PQ8NGN8 299 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 OR10R2Q8NGX6 335 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 CNBD2Q96M20 576 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 CABLES2Q9BTV7 478 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.13□□□□□ -0.31
CPSF4-203ENST00000430038 ZNF221Q9UK13 617 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 MGAT4AQ9UM21 535 aa13.13□□□□□ -0.31
CPSF4-203ENST00000430038 DYNC2H1Q8NCM8 4307 aaKnown RBP13.12□□□□□ -0.31
CPSF4-203ENST00000430038 A0A075B6Q4 140 aa13.12□□□□□ -0.31
CPSF4-203ENST00000430038 TRAV1-2A0A0B4J238 106 aa13.12□□□□□ -0.31
CPSF4-203ENST00000430038 TRIM64CA6NLI5 447 aa13.12□□□□□ -0.31
CPSF4-203ENST00000430038 IFITM5A6NNB3 132 aa13.12□□□□□ -0.31
CPSF4-203ENST00000430038 TPPP2P59282 170 aa13.12□□□□□ -0.31
CPSF4-203ENST00000430038 TMEM267Q0VDI3 215 aaPredicted RBP13.12□□□□□ -0.31
CPSF4-203ENST00000430038 PDPNQ86YL7 162 aa13.12□□□□□ -0.31
CPSF4-203ENST00000430038 GRPEL2Q8TAA5 225 aa13.12□□□□□ -0.31
CPSF4-203ENST00000430038 FLYWCH2Q96CP2 140 aaKnown RBP13.12□□□□□ -0.31
CPSF4-203ENST00000430038 RAB3CQ96E17 227 aa13.12□□□□□ -0.31
CPSF4-203ENST00000430038 OR2D2Q9H210 308 aa13.12□□□□□ -0.31
CPSF4-203ENST00000430038 SLC35D1Q9NTN3 355 aa13.12□□□□□ -0.31
CPSF4-203ENST00000430038 HSPB1P04792 205 aaKnown RBP13.11□□□□□ -0.31
CPSF4-203ENST00000430038 BVESQ8NE79 360 aa13.11□□□□□ -0.31
CPSF4-203ENST00000430038 TSNAXQ99598 290 aaKnown RBP13.11□□□□□ -0.31
CPSF4-203ENST00000430038 NDUFB11Q9NX14 153 aa13.11□□□□□ -0.31
CPSF4-203ENST00000430038 ADAM30Q9UKF2 790 aa13.11□□□□□ -0.31
CPSF4-203ENST00000430038 SMAD5-AS1Q9Y6J3 95 aa13.11□□□□□ -0.31
CPSF4-203ENST00000430038 LINC00473A8K010 186 aa13.1□□□□□ -0.31
CPSF4-203ENST00000430038 SPDEFO95238 335 aa13.1□□□□□ -0.31
CPSF4-203ENST00000430038 TRGV3P03979 118 aa13.1□□□□□ -0.31
CPSF4-203ENST00000430038 HIST1H1DP16402 221 aaKnown RBP13.1□□□□□ -0.31
CPSF4-203ENST00000430038 C22orf42Q6IC83 251 aa13.1□□□□□ -0.31
CPSF4-203ENST00000430038 IL34Q6ZMJ4 242 aa13.1□□□□□ -0.31
CPSF4-203ENST00000430038 ZNF367Q7RTV3 350 aa13.1□□□□□ -0.31
CPSF4-203ENST00000430038 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.1□□□□□ -0.31
CPSF4-203ENST00000430038 DDB2Q92466 427 aa13.1□□□□□ -0.31
CPSF4-203ENST00000430038 CSMD3Q7Z407 3707 aa13.1□□□□□ -0.31
CPSF4-203ENST00000430038 TRDV1A0A1B0GX56 115 aa13.09□□□□□ -0.31
CPSF4-203ENST00000430038 TRBV12-3P01733 135 aa13.09□□□□□ -0.31
CPSF4-203ENST00000430038 APOA2P02652 100 aa13.09□□□□□ -0.31
CPSF4-203ENST00000430038 APELAP0DMC3 54 aa13.09□□□□□ -0.31
CPSF4-203ENST00000430038 GP9P14770 177 aa13.09□□□□□ -0.31
CPSF4-203ENST00000430038 TMEM177Q53S58 311 aa13.09□□□□□ -0.31
CPSF4-203ENST00000430038 PYHIN1Q6K0P9 492 aa13.09□□□□□ -0.31
CPSF4-203ENST00000430038 H1FOOQ8IZA3 346 aaPredicted RBP13.09□□□□□ -0.31
CPSF4-203ENST00000430038 Q8N1Y9 231 aa13.09□□□□□ -0.31
CPSF4-203ENST00000430038 RYR2Q92736 4967 aa13.09□□□□□ -0.31
CPSF4-203ENST00000430038 ANKRD34BA5PLL1 514 aa13.08□□□□□ -0.32
CPSF4-203ENST00000430038 J3QRK9 145 aa13.08□□□□□ -0.32
CPSF4-203ENST00000430038 FRMD6-AS1P0C7T7 363 aa13.08□□□□□ -0.32
CPSF4-203ENST00000430038 RAB3BP20337 219 aa13.08□□□□□ -0.32
CPSF4-203ENST00000430038 RAB6AP20340 208 aa13.08□□□□□ -0.32
CPSF4-203ENST00000430038 SERPINB10P48595 397 aa13.08□□□□□ -0.32
CPSF4-203ENST00000430038 PSMD7P51665 324 aa13.08□□□□□ -0.32
CPSF4-203ENST00000430038 IDO2Q6ZQW0 420 aa13.08□□□□□ -0.32
CPSF4-203ENST00000430038 POC5Q8NA72 575 aa13.08□□□□□ -0.32
CPSF4-203ENST00000430038 OR10J5Q8NHC4 309 aa13.08□□□□□ -0.32
CPSF4-203ENST00000430038 SLA2Q9H6Q3 261 aa13.08□□□□□ -0.32
CPSF4-203ENST00000430038 ZNF355PQ9NSJ1 428 aa13.08□□□□□ -0.32
CPSF4-203ENST00000430038 TENM2Q9NT68 2774 aa13.08□□□□□ -0.32
CPSF4-203ENST00000430038 PDCD5O14737 125 aa13.07□□□□□ -0.32
CPSF4-203ENST00000430038 DUTP33316 252 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms