RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 UBQLN2Q9UHD9 624 aa12.46□□□□□ -0.41
ACTB-204ENST00000425660 A0A1W2PPE3 182 aa12.46□□□□□ -0.42
ACTB-204ENST00000425660 PPIHO43447 177 aaKnown RBP12.46□□□□□ -0.42
ACTB-204ENST00000425660 S1PR2O95136 353 aa12.46□□□□□ -0.42
ACTB-204ENST00000425660 MMP9P14780 707 aa12.46□□□□□ -0.42
ACTB-204ENST00000425660 EFNA4P52798 201 aa12.46□□□□□ -0.42
ACTB-204ENST00000425660 UBA52P62987 128 aaKnown RBP12.46□□□□□ -0.42
ACTB-204ENST00000425660 TLE4Q04727 773 aa12.46□□□□□ -0.42
ACTB-204ENST00000425660 OR2B11Q5JQS5 317 aa12.46□□□□□ -0.42
ACTB-204ENST00000425660 GPR157Q5UAW9 335 aa12.46□□□□□ -0.42
ACTB-204ENST00000425660 WDR25Q64LD2 544 aaPredicted RBP12.46□□□□□ -0.42
ACTB-204ENST00000425660 STOML3Q8TAV4 291 aa12.46□□□□□ -0.42
ACTB-204ENST00000425660 CACNG5Q9UF02 275 aa12.46□□□□□ -0.42
ACTB-204ENST00000425660 ATP6V1G1O75348 118 aa12.45□□□□□ -0.42
ACTB-204ENST00000425660 RBP4P02753 201 aa12.45□□□□□ -0.42
ACTB-204ENST00000425660 HTR2BP41595 481 aa12.45□□□□□ -0.42
ACTB-204ENST00000425660 GNG10P50151 68 aa12.45□□□□□ -0.42
ACTB-204ENST00000425660 POLR2GP62487 172 aaKnown RBP eCLIP12.45□□□□□ -0.42
ACTB-204ENST00000425660 ZNF816Q0VGE8 651 aaPredicted RBP12.45□□□□□ -0.42
ACTB-204ENST00000425660 LYG1Q8N1E2 194 aa12.45□□□□□ -0.42
ACTB-204ENST00000425660 LINC00311Q8N616 119 aa12.45□□□□□ -0.42
ACTB-204ENST00000425660 RNASE11Q8TAA1 199 aaKnown RBP12.45□□□□□ -0.42
ACTB-204ENST00000425660 ST8SIA2Q92186 375 aa12.45□□□□□ -0.42
ACTB-204ENST00000425660 ADTRPQ96IZ2 230 aa12.45□□□□□ -0.42
ACTB-204ENST00000425660 CYTL1Q9NRR1 136 aa12.45□□□□□ -0.42
ACTB-204ENST00000425660 PRELID3BQ9Y3B1 194 aa12.45□□□□□ -0.42
ACTB-204ENST00000425660 F5H0A9 414 aaPredicted RBP12.44□□□□□ -0.42
ACTB-204ENST00000425660 TAAR5O14804 337 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 HPRT1P00492 218 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 KRASP01116 189 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 IGHV1-8P0DP01 117 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 KIR2DS2P43631 304 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 SRSF1Q07955 248 aaKnown RBP eCLIP12.44□□□□□ -0.421e-10■■■□□ 15.6
ACTB-204ENST00000425660 IZUMO4Q1ZYL8 232 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 PHYHIPLQ96FC7 376 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 ZNF471Q9BX82 626 aaPredicted RBP12.44□□□□□ -0.42
ACTB-204ENST00000425660 SPTAN1Q13813 2472 aaKnown RBP12.44□□□□□ -0.42
ACTB-204ENST00000425660 A0A1W2PPH5 198 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 MARCH11A6NNE9 402 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 FAM90A26D6RGX4 464 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 FCGR3BO75015 233 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 NDUFS7O75251 213 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 SPDEFO95238 335 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 PVALBP20472 110 aaPredicted RBP12.44□□□□□ -0.42
ACTB-204ENST00000425660 EPHA1P21709 976 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 G6PCP35575 357 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 THBS3P49746 956 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 MIDNQ504T8 468 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 ZNF833PQ6ZTB9 187 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 LY6G5BQ8NDX9 201 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 SCARB1Q8WTV0 552 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 S1PR3Q99500 378 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 GSX2Q9BZM3 304 aa12.44□□□□□ -0.42
ACTB-204ENST00000425660 PATZ1Q9HBE1 687 aaKnown RBP12.44□□□□□ -0.42
ACTB-204ENST00000425660 RPS10-NUDT3A0A1W2PQS6 291 aa12.43□□□□□ -0.42
ACTB-204ENST00000425660 TOR1AO14656 332 aa12.43□□□□□ -0.42
ACTB-204ENST00000425660 ZNF137PP52743 207 aa12.43□□□□□ -0.42
ACTB-204ENST00000425660 FAM71F2Q6NXP2 309 aa12.43□□□□□ -0.42
ACTB-204ENST00000425660 OR2C3Q8N628 320 aa12.43□□□□□ -0.42
ACTB-204ENST00000425660 LYRM2Q9NU23 88 aaPredicted RBP12.43□□□□□ -0.42
ACTB-204ENST00000425660 MALRD1Q5VYJ5 2156 aa12.43□□□□□ -0.42
ACTB-204ENST00000425660 UTP20O75691 2785 aaKnown RBP12.42□□□□□ -0.42
ACTB-204ENST00000425660 FAM90A9PA6NNJ1 464 aa12.42□□□□□ -0.42
ACTB-204ENST00000425660 J3QR06 171 aa12.42□□□□□ -0.42
ACTB-204ENST00000425660 SSSCA1O60232 199 aa12.42□□□□□ -0.42
ACTB-204ENST00000425660 GPR137BO60478 399 aa12.42□□□□□ -0.42
ACTB-204ENST00000425660 TMEM50AO95807 157 aa12.42□□□□□ -0.42
ACTB-204ENST00000425660 ARHGDIBP52566 201 aa12.42□□□□□ -0.42
ACTB-204ENST00000425660 AARDQ4LEZ3 155 aa12.42□□□□□ -0.42
ACTB-204ENST00000425660 CLLU1Q5K131 121 aa12.42□□□□□ -0.42
ACTB-204ENST00000425660 OR8H3Q8N146 312 aa12.42□□□□□ -0.42
ACTB-204ENST00000425660 ZNF383Q8NA42 475 aa12.42□□□□□ -0.42
ACTB-204ENST00000425660 OR4S2Q8NH73 311 aa12.42□□□□□ -0.42
ACTB-204ENST00000425660 MAGT1Q9H0U3 335 aa12.42□□□□□ -0.42
ACTB-204ENST00000425660 SESN1Q9Y6P5 492 aa12.42□□□□□ -0.42
ACTB-204ENST00000425660 PPIAL4CA0A0B4J2A2 164 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 CHST1O43916 411 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 PPIAL4GP0DN37 164 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 PLA2G2AP14555 144 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 GPR6P46095 362 aaPredicted RBP12.41□□□□□ -0.42
ACTB-204ENST00000425660 PAX9P55771 341 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 ALKAL2Q6UX46 152 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 SLC7A5P1Q8MH63 180 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 OR9G1Q8NH87 305 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 TNFRSF14Q92956 283 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 R3HDM4Q96D70 268 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 RAB40CQ96S21 281 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 TMEM133Q9H2Q1 129 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 ZNRD1Q9P1U0 126 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 HSPB7Q9UBY9 170 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 WSB1Q9Y6I7 421 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 WRBO00258 174 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 GAPDHP04406 335 aaKnown RBP12.41□□□□□ -0.42
ACTB-204ENST00000425660 CT45A6P0DMU7 189 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 CT45A5P0DMU8 189 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 CT45A7P0DMV0 189 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 TPT1P13693 172 aaKnown RBP12.41□□□□□ -0.42
ACTB-204ENST00000425660 H2BFWTQ7Z2G1 175 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 BAP18Q8IXM2 172 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 ZNF295-AS1Q8N0V1 137 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms