RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 A0A1B0GW15 77 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 A0A1W2PPV4 95 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 NKX2-6A6NCS4 301 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 ARRDC5A6NEK1 342 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF860A6NHJ4 632 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR5B21A6NL26 309 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 GJE1A6NN92 205 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR11H12B2RN74 326 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 UMAD1C9J7I0 102 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 TRAPPC2LH3BP13 241 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 H7BYZ3 331 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 TNFRSF11BO00300 401 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 SIVA1O15304 175 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 RBFOX2O43251 390 aaKnown RBP eCLIP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 GNG7O60262 68 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR7C2O60412 319 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 GCM2O75603 506 aaPredicted RBP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF682O95780 498 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 IGSF6O95976 241 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 HLA-DPB1P04440 258 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 CTSDP07339 412 aaPredicted RBP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 DCNP07585 359 aaKnown RBP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR10J4P0C629 311 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR8U9P0C7N5 309 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR5H8P0DN80 308 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 ALPPL2P10696 532 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 ATF1P18846 271 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 KITLGP21583 273 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 FCARP24071 287 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 PRDX3P30048 256 aaKnown RBP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 KDELR2P33947 212 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 SNCAP37840 140 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 FRKP42685 505 aaPredicted RBP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 GPR6P46095 362 aaPredicted RBP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 CSNK1A1P48729 337 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 ARRB1P49407 418 aaPredicted RBP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 P2RX1P51575 399 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 ATP1B3P54709 279 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 RAB38P57729 211 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 TAS2R19P59542 299 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 CKS1BP61024 79 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 ARG2P78540 354 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF763Q0D2J5 394 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 RAB31Q13636 194 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 EBPQ15125 230 aaKnown RBP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 RGNQ15493 299 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR7A5Q15622 319 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 BATFQ16520 125 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR2G6Q5TZ20 316 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 CDC42EP5Q6NZY7 148 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 NIPAL3Q6P499 406 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 SFXN4Q6P4A7 337 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 RPL22L1Q6P5R6 122 aaKnown RBP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 SMARCD3Q6STE5 483 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 MBOAT2Q6ZWT7 520 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 GLT6D1Q7Z4J2 308 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 YRDCQ86U90 279 aaKnown RBP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 AMZ2Q86W34 360 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 C20orf196Q8IYI0 205 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 BOD1L2Q8IYS8 172 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 EID2Q8N6I1 236 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 COX18Q8N8Q8 333 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 FER1L6-AS1Q8NA97 138 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 NHLRC2Q8NBF2 726 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 PLPP5Q8NEB5 264 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 STEAP2Q8NFT2 490 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR11H1Q8NG94 326 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR4D9Q8NGE8 314 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR1N2Q8NGR9 330 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR11H2Q8NH07 326 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR5AK2Q8NH90 309 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 RHEBL1Q8TAI7 183 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 SLC7A13Q8TCU3 470 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 GEMIN6Q8WXD5 167 aaKnown RBP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 GLYATL1Q969I3 302 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 FAM46BQ96A09 425 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 RAB39BQ96DA2 213 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 ZFP3Q96NJ6 502 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 ACCSQ96QU6 501 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 OR7D2Q96RA2 312 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 RNF126Q9BV68 326 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 PLA2G2FQ9BZM2 168 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 CHRNA10Q9GZZ6 450 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 RERGLQ9H628 205 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 YAE1D1Q9NRH1 226 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM38BQ9NVV0 291 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 LHX3Q9UBR4 397 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 TBX21Q9UL17 535 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 PSG8Q9UQ74 426 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 FARSAQ9Y285 508 aaKnown RBP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 SIGLEC7Q9Y286 467 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 SLC17A4Q9Y2C5 497 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 LAMTOR2Q9Y2Q5 125 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 RPL36Q9Y3U8 105 aaKnown RBP2.21□□□□□ -2.06
LINC01040-201ENST00000425048 KIAA2026Q5HYC2 2103 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF831Q5JPB2 1677 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 TRAV25A0A0B4J276 109 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 A0A0B4J2A0 478 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 IGHV1-69-2A0A0G2JMI3 117 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms