RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SMIM18P0DKX4 95 aa15.9■□□□□ 0.14
GTF3A-202ENST00000419181 PSMB8P28062 276 aa15.9■□□□□ 0.14
GTF3A-202ENST00000419181 THBS3P49746 956 aa15.9■□□□□ 0.14
GTF3A-202ENST00000419181 PLGLAQ15195 96 aa15.9■□□□□ 0.14
GTF3A-202ENST00000419181 PSG5Q15238 335 aa15.9■□□□□ 0.14
GTF3A-202ENST00000419181 CNIH2Q6PI25 160 aa15.9■□□□□ 0.14
GTF3A-202ENST00000419181 LINC00482Q8N8I6 264 aa15.9■□□□□ 0.14
GTF3A-202ENST00000419181 TSNAXQ99598 290 aaKnown RBP15.9■□□□□ 0.14
GTF3A-202ENST00000419181 DIABLOQ9NR28 239 aa15.9■□□□□ 0.14
GTF3A-202ENST00000419181 SLC35D1Q9NTN3 355 aa15.9■□□□□ 0.14
GTF3A-202ENST00000419181 ANXA10Q9UJ72 324 aa15.9■□□□□ 0.14
GTF3A-202ENST00000419181 WSB1Q9Y6I7 421 aa15.9■□□□□ 0.14
GTF3A-202ENST00000419181 PRKDCP78527 4128 aaKnown RBP15.9■□□□□ 0.14
GTF3A-202ENST00000419181 FCN1O00602 326 aa15.89■□□□□ 0.13
GTF3A-202ENST00000419181 CRIP2P52943 208 aaPredicted RBP15.89■□□□□ 0.13
GTF3A-202ENST00000419181 RPS16P62249 146 aaKnown RBP15.89■□□□□ 0.13
GTF3A-202ENST00000419181 CX3CL1P78423 397 aa15.89■□□□□ 0.13
GTF3A-202ENST00000419181 ZNF660Q6AZW8 331 aaPredicted RBP15.89■□□□□ 0.13
GTF3A-202ENST00000419181 SLC25A46Q96AG3 418 aa15.89■□□□□ 0.13
GTF3A-202ENST00000419181 FLYWCH2Q96CP2 140 aaKnown RBP15.89■□□□□ 0.13
GTF3A-202ENST00000419181 AUNIPQ9H7T9 357 aa15.89■□□□□ 0.13
GTF3A-202ENST00000419181 METTL1Q9UBP6 276 aaKnown RBP15.89■□□□□ 0.13
GTF3A-202ENST00000419181 FBXO7Q9Y3I1 522 aa15.89■□□□□ 0.13
GTF3A-202ENST00000419181 OR2W1Q9Y3N9 320 aa15.89■□□□□ 0.13
GTF3A-202ENST00000419181 TRAV41A0A0B4J266 112 aa15.88■□□□□ 0.13
GTF3A-202ENST00000419181 IGLL1P15814 213 aa15.88■□□□□ 0.13
GTF3A-202ENST00000419181 NFYAP23511 347 aaPredicted RBP15.88■□□□□ 0.13
GTF3A-202ENST00000419181 CDX1P47902 265 aaPredicted RBP15.88■□□□□ 0.13
GTF3A-202ENST00000419181 NCS1P62166 190 aa15.88■□□□□ 0.13
GTF3A-202ENST00000419181 TAGLNQ01995 201 aaKnown RBP15.88■□□□□ 0.13
GTF3A-202ENST00000419181 C19orf54Q5BKX5 351 aa15.88■□□□□ 0.13
GTF3A-202ENST00000419181 UBE2NLQ5JXB2 153 aa15.88■□□□□ 0.13
GTF3A-202ENST00000419181 MRPL41Q8IXM3 137 aaKnown RBP15.88■□□□□ 0.13
GTF3A-202ENST00000419181 MINDY2Q8NBR6 621 aa15.88■□□□□ 0.13
GTF3A-202ENST00000419181 BEST4Q8NFU0 473 aa15.88■□□□□ 0.13
GTF3A-202ENST00000419181 MYOZ3Q8TDC0 251 aa15.88■□□□□ 0.13
GTF3A-202ENST00000419181 XRCC3O43542 346 aa15.87■□□□□ 0.13
GTF3A-202ENST00000419181 IGLV1-40P01703 118 aa15.87■□□□□ 0.13
GTF3A-202ENST00000419181 HLA-DQB1P01920 261 aa15.87■□□□□ 0.13
GTF3A-202ENST00000419181 DUTP33316 252 aaKnown RBP15.87■□□□□ 0.13
GTF3A-202ENST00000419181 LUMP51884 338 aaPredicted RBP15.87■□□□□ 0.13
GTF3A-202ENST00000419181 HOGA1Q86XE5 327 aa15.87■□□□□ 0.13
GTF3A-202ENST00000419181 GVQW1Q8N7I0 195 aa15.87■□□□□ 0.13
GTF3A-202ENST00000419181 DDB2Q92466 427 aa15.87■□□□□ 0.13
GTF3A-202ENST00000419181 RCC1LQ96I51 464 aaKnown RBP15.87■□□□□ 0.13
GTF3A-202ENST00000419181 P2RX4Q99571 388 aa15.87■□□□□ 0.13
GTF3A-202ENST00000419181 TPSG1Q9NRR2 321 aa15.87■□□□□ 0.13
GTF3A-202ENST00000419181 TGP01266 2768 aa15.87■□□□□ 0.13
GTF3A-202ENST00000419181 SLC25A17O43808 307 aa15.86■□□□□ 0.13
GTF3A-202ENST00000419181 TUSC2O75896 110 aa15.86■□□□□ 0.13
GTF3A-202ENST00000419181 IGLV2-23P01705 113 aa15.86■□□□□ 0.13
GTF3A-202ENST00000419181 EGR2P11161 476 aaPredicted RBP15.86■□□□□ 0.13
GTF3A-202ENST00000419181 PTHLHP12272 177 aa15.86■□□□□ 0.13
GTF3A-202ENST00000419181 MYCNOSP40205 109 aa15.86■□□□□ 0.13
GTF3A-202ENST00000419181 LGALS7P47929 136 aa15.86■□□□□ 0.13
GTF3A-202ENST00000419181 VBP1P61758 197 aa15.86■□□□□ 0.13
GTF3A-202ENST00000419181 RTL8BQ17RB0 113 aa15.86■□□□□ 0.13
GTF3A-202ENST00000419181 ZNF562Q6V9R5 426 aa15.86■□□□□ 0.13
GTF3A-202ENST00000419181 ZNF645Q8N7E2 425 aa15.86■□□□□ 0.13
GTF3A-202ENST00000419181 SAMD12Q8N8I0 201 aa15.86■□□□□ 0.13
GTF3A-202ENST00000419181 KCTD12Q96CX2 325 aaKnown RBP15.86■□□□□ 0.13
GTF3A-202ENST00000419181 S100A16Q96FQ6 103 aaKnown RBP15.86■□□□□ 0.13
GTF3A-202ENST00000419181 RAX2Q96IS3 184 aa15.86■□□□□ 0.13
GTF3A-202ENST00000419181 ADTRPQ96IZ2 230 aa15.86■□□□□ 0.13
GTF3A-202ENST00000419181 IGKV1D-13A0A0B4J2D9 117 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 LINC00473A8K010 186 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 J3QRK9 145 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 CA2P00918 260 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 IGKV1-13P0DP09 117 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 RRASP10301 218 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 ECSCRQ19T08 205 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 TMEM177Q53S58 311 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 BVESQ8NE79 360 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 C4orf3Q8WVX3 66 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 HARBI1Q96MB7 349 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 CLCC1Q96S66 551 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 KLK15Q9H2R5 256 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 NUBP2Q9Y5Y2 271 aa15.85■□□□□ 0.13
GTF3A-202ENST00000419181 SOX15O60248 233 aa15.84■□□□□ 0.13
GTF3A-202ENST00000419181 SLC22A5O76082 557 aa15.84■□□□□ 0.13
GTF3A-202ENST00000419181 DUS4LO95620 317 aaKnown RBP15.84■□□□□ 0.13
GTF3A-202ENST00000419181 IGLV2-14P01704 120 aa15.84■□□□□ 0.13
GTF3A-202ENST00000419181 ARPC4P59998 168 aa15.84■□□□□ 0.13
GTF3A-202ENST00000419181 CBX3Q13185 183 aa15.84■□□□□ 0.13
GTF3A-202ENST00000419181 KIAA0141Q14154 515 aaPredicted RBP15.84■□□□□ 0.13
GTF3A-202ENST00000419181 TMEM65Q6PI78 240 aa15.84■□□□□ 0.13
GTF3A-202ENST00000419181 PPP1R27Q86WC6 154 aa15.84■□□□□ 0.13
GTF3A-202ENST00000419181 TCTEX1D1Q8N7M0 179 aa15.84■□□□□ 0.13
GTF3A-202ENST00000419181 DUX3Q96PT4 197 aa15.84■□□□□ 0.13
GTF3A-202ENST00000419181 CCL24O00175 119 aa15.83■□□□□ 0.12
GTF3A-202ENST00000419181 SHOXO15266 292 aa15.83■□□□□ 0.12
GTF3A-202ENST00000419181 GABARAPO95166 117 aa15.83■□□□□ 0.12
GTF3A-202ENST00000419181 CRYGBP07316 175 aa15.83■□□□□ 0.12
GTF3A-202ENST00000419181 CBX5P45973 191 aa15.83■□□□□ 0.12
GTF3A-202ENST00000419181 DEFB136Q30KP8 78 aa15.83■□□□□ 0.12
GTF3A-202ENST00000419181 TMEM69Q5SWH9 247 aa15.83■□□□□ 0.12
GTF3A-202ENST00000419181 ANKRD13BQ86YJ7 626 aa15.83■□□□□ 0.12
GTF3A-202ENST00000419181 ZNF491Q8N8L2 437 aa15.83■□□□□ 0.12
GTF3A-202ENST00000419181 ABHD5Q8WTS1 349 aa15.83■□□□□ 0.12
GTF3A-202ENST00000419181 SNAPC3Q92966 411 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms