RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ANKRD13BQ86YJ7 626 aa11.34□□□□□ -0.59
RPS28-201ENST00000417088 OR5T1Q8NG75 326 aa11.34□□□□□ -0.59
RPS28-201ENST00000417088 TMEM203Q969S6 136 aa11.34□□□□□ -0.59
RPS28-201ENST00000417088 ARHGAP5-AS1Q96IT6 56 aa11.34□□□□□ -0.59
RPS28-201ENST00000417088 RSRP1Q9BUV0 290 aa11.34□□□□□ -0.59
RPS28-201ENST00000417088 PLGRKTQ9HBL7 147 aa11.34□□□□□ -0.59
RPS28-201ENST00000417088 PALMDQ9NP74 551 aa11.34□□□□□ -0.59
RPS28-201ENST00000417088 EPPK1P58107 5090 aaKnown RBP11.33□□□□□ -0.6
RPS28-201ENST00000417088 C13orf42A0A1B0GVH6 325 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 ANKRD34BA5PLL1 514 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 TRDCB7Z8K6 153 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 M0R1X1 148 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 CASQ2O14958 399 aaPredicted RBP11.33□□□□□ -0.6
RPS28-201ENST00000417088 IGLV2-23P01705 113 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 ZP3P21754 424 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 VEGFCP49767 419 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 PJVKQ0ZLH3 352 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 KLF5Q13887 457 aaPredicted RBP11.33□□□□□ -0.6
RPS28-201ENST00000417088 IRF3Q14653 427 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 MED22Q15528 200 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 LIPKQ5VXJ0 399 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 IL34Q6ZMJ4 242 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 TMEM91Q6ZNR0 172 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 CMSS1Q9BQ75 279 aaKnown RBP11.33□□□□□ -0.6
RPS28-201ENST00000417088 PECRQ9BY49 303 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 SLC35D1Q9NTN3 355 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 RDH8Q9NYR8 311 aa11.33□□□□□ -0.6
RPS28-201ENST00000417088 AK6Q9Y3D8 172 aaKnown RBP11.33□□□□□ -0.6
RPS28-201ENST00000417088 TNCP24821 2201 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 DNAH1Q9P2D7 4330 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 A0A0G2JLM5 398 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 LCE6AA0A183 80 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 CNIH1O95406 144 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 CRYGBP07316 175 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 LGALS7P47929 136 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 RAB11BQ15907 218 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 PLAC9Q5JTB6 97 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 ZFAND6Q6FIF0 208 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 SGPP2Q8IWX5 399 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.32□□□□□ -0.6
RPS28-201ENST00000417088 UFD1Q92890 307 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 EDA2RQ9HAV5 297 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 CSMD3Q7Z407 3707 aa11.32□□□□□ -0.6
RPS28-201ENST00000417088 BIRC6Q9NR09 4857 aa11.31□□□□□ -0.6
RPS28-201ENST00000417088 CD3GP09693 182 aa11.31□□□□□ -0.6
RPS28-201ENST00000417088 CLDN12P56749 244 aa11.31□□□□□ -0.6
RPS28-201ENST00000417088 RPS25P62851 125 aaKnown RBP11.31□□□□□ -0.6
RPS28-201ENST00000417088 TPBGQ13641 420 aa11.31□□□□□ -0.6
RPS28-201ENST00000417088 MOGAT2Q3SYC2 334 aa11.31□□□□□ -0.6
RPS28-201ENST00000417088 OR56B1Q8NGI3 324 aa11.31□□□□□ -0.6
RPS28-201ENST00000417088 OR4A4PQ8NGN8 299 aa11.31□□□□□ -0.6
RPS28-201ENST00000417088 OR9G4Q8NGQ1 327 aa11.31□□□□□ -0.6
RPS28-201ENST00000417088 LYSTQ99698 3801 aa11.31□□□□□ -0.6
RPS28-201ENST00000417088 BRI3O95415 125 aa11.3□□□□□ -0.6
RPS28-201ENST00000417088 SERPINB10P48595 397 aa11.3□□□□□ -0.6
RPS28-201ENST00000417088 SYNJ2BPP57105 145 aa11.3□□□□□ -0.6
RPS28-201ENST00000417088 DEFA5Q01523 94 aa11.3□□□□□ -0.6
RPS28-201ENST00000417088 PLA2G7Q13093 441 aa11.3□□□□□ -0.6
RPS28-201ENST00000417088 C2orf76Q3KRA6 126 aa11.3□□□□□ -0.6
RPS28-201ENST00000417088 ZNF343Q6P1L6 599 aa11.3□□□□□ -0.6
RPS28-201ENST00000417088 FAM3DQ96BQ1 224 aa11.3□□□□□ -0.6
RPS28-201ENST00000417088 C5orf30Q96GV9 206 aa11.3□□□□□ -0.6
RPS28-201ENST00000417088 TMEM68Q96MH6 324 aa11.3□□□□□ -0.6
RPS28-201ENST00000417088 TINAGL1Q9GZM7 467 aaPredicted RBP11.3□□□□□ -0.6
RPS28-201ENST00000417088 SDHAF2Q9NX18 166 aa11.3□□□□□ -0.6
RPS28-201ENST00000417088 SCN3BQ9NY72 215 aa11.3□□□□□ -0.6
RPS28-201ENST00000417088 KCNK7Q9Y2U2 307 aa11.3□□□□□ -0.6
RPS28-201ENST00000417088 SRRM4A7MD48 611 aaKnown RBP11.29□□□□□ -0.6
RPS28-201ENST00000417088 H0Y980 276 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 BET1O15155 118 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 FABP7O15540 132 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 DENRO43583 198 aaKnown RBP11.29□□□□□ -0.6
RPS28-201ENST00000417088 ARL6IP5O75915 188 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 TRBV12-3P01733 135 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 HSMCR30P0CW71 290 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 MRGPRG-AS1Q2M3A8 158 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 TMEM177Q53S58 311 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 IGSF11Q5DX21 431 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 BVESQ8NE79 360 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 ISOC1Q96CN7 298 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 HARBI1Q96MB7 349 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 THAP7Q9BT49 309 aaPredicted RBP11.29□□□□□ -0.6
RPS28-201ENST00000417088 CABLES2Q9BTV7 478 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 OR2D2Q9H210 308 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 PEF1Q9UBV8 284 aaKnown RBP11.29□□□□□ -0.6
RPS28-201ENST00000417088 ADAM30Q9UKF2 790 aa11.29□□□□□ -0.6
RPS28-201ENST00000417088 TRBV6-7A0A0A0MS04 114 aa11.28□□□□□ -0.6
RPS28-201ENST00000417088 RBMXL2O75526 392 aaKnown RBP11.28□□□□□ -0.6
RPS28-201ENST00000417088 CSN3P07498 182 aa11.28□□□□□ -0.6
RPS28-201ENST00000417088 FCGR3AP08637 254 aa11.28□□□□□ -0.6
RPS28-201ENST00000417088 GSTT2P0CG29 244 aa11.28□□□□□ -0.6
RPS28-201ENST00000417088 GSTT2BP0CG30 244 aa11.28□□□□□ -0.6
RPS28-201ENST00000417088 AADACP22760 399 aa11.28□□□□□ -0.6
RPS28-201ENST00000417088 CALRP27797 417 aaKnown RBP11.28□□□□□ -0.6
RPS28-201ENST00000417088 DYRK1AQ13627 763 aa11.28□□□□□ -0.6
RPS28-201ENST00000417088 TRAM1Q15629 374 aa11.28□□□□□ -0.6
RPS28-201ENST00000417088 HAGHQ16775 308 aa11.28□□□□□ -0.6
RPS28-201ENST00000417088 SPATA25Q9BR10 227 aa11.28□□□□□ -0.6
RPS28-201ENST00000417088 VCXQ9H320 206 aa11.28□□□□□ -0.6
RPS28-201ENST00000417088 DUSP21Q9H596 190 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms