RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 DVL1P1P54792 670 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-202ENST00000409915 RANP62826 216 aaKnown RBP3.81□□□□□ -1.8
SF3B1-202ENST00000409915 SLC35A1P78382 337 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 MFGE8Q08431 387 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-202ENST00000409915 ZP4Q12836 540 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 C1DQ13901 141 aaKnown RBP3.81□□□□□ -1.8
SF3B1-202ENST00000409915 SLC17A1Q14916 467 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 GUSBP1Q15486 140 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 OR7A5Q15622 319 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 UBE2V2Q15819 145 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 IQCJQ1A5X6 159 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 SMIM21Q3B7S5 101 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 SNAI3Q3KNW1 292 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 SLC25A35Q3KQZ1 300 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 C5orf47Q569G3 176 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 PAPPA-AS1Q5QFB9 102 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 C1orf140Q5VVS0 124 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 TMPPEQ6ZT21 453 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 ACOT7LQ6ZUV0 252 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 FAM220AQ7Z4H9 259 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 MED12LQ86YW9 2145 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 TOMM5Q8N4H5 51 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 JAGN1Q8N5M9 183 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 INO80EQ8NBZ0 244 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-202ENST00000409915 ZNF485Q8NCK3 441 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 OR51D1Q8NGF3 324 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 LINC01560Q8TB33 94 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 GPR148Q8TDV2 347 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 CASTOR1Q8WTX7 329 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 FAM222BQ8WU58 562 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 SMIM4Q8WVI0 70 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 DDIT4LQ96D03 193 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 STARD4Q96DR4 205 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 MUCL1Q96DR8 90 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 GMPPAQ96IJ6 420 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-202ENST00000409915 OR8B4Q96RC9 309 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 MCHR1Q99705 422 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 MIEN1Q9BRT3 115 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 FAAP24Q9BTP7 215 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 SCRT1Q9BWW7 348 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 SLC25A31Q9H0C2 315 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 MEGF9Q9H1U4 602 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 WDR13Q9H1Z4 485 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 RHOFQ9HBH0 211 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 WFDC1Q9HC57 220 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 FGF20Q9NP95 211 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-202ENST00000409915 EXOSC4Q9NPD3 245 aaKnown RBP3.81□□□□□ -1.8
SF3B1-202ENST00000409915 CA10Q9NS85 328 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 CLN6Q9NWW5 311 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 MRPL27Q9P0M9 148 aaKnown RBP3.81□□□□□ -1.8
SF3B1-202ENST00000409915 COMMD3Q9UBI1 195 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 PROCRQ9UNN8 238 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 PAM16Q9Y3D7 125 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 URGCP-MRPS24S4R325 110 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 ARHGAP21Q5T5U3 1957 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 TACC2O95359 2948 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 CSMD1Q96PZ7 3565 aa3.81□□□□□ -1.8
SF3B1-202ENST00000409915 ABCA12Q86UK0 2595 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 TRBV6-7A0A0A0MS04 114 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 TRAV14DV4A0A0A6YYC5 116 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 A0A1B0GTI1 187 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 KANTRA0A1W2PQU2 76 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 ANKRD20A5PA0PJZ0 165 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 IRGMA1A4Y4 181 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 FTCDNL1E5RQL4 147 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 PPP5D1E7EU14 171 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 F5H5P2 479 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 K7ERU9 68 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 SNAI2O43623 268 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 SS18L1O75177 396 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-202ENST00000409915 NPIPB7O75200 414 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 FCN3O75636 299 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 NDUFB6O95139 128 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 PMS2P2O95744 297 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 CGAP01215 116 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 IGHV3-9P01782 118 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 BGLAPP02818 100 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 CST2P09228 141 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 UCHL1P09936 223 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 SFTA3P0C7M3 94 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 OR5H8P0DN80 308 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 MED14OSP0DP75 135 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 COX6B1P14854 86 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 SELEP16581 610 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 GZMHP20718 246 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 SERPINA2P20848 420 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 KITLGP21583 273 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 LMO1P25800 156 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 GRPRP30550 384 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 RPL4P36578 427 aaKnown RBP3.8□□□□□ -1.8
SF3B1-202ENST00000409915 ID1P41134 155 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 HMGA2P52926 109 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 ELLP55199 621 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-202ENST00000409915 FOXG1P55316 489 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-202ENST00000409915 NDUFA6P56556 154 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 H2BFSP57053 126 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 TAS2R41P59536 307 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 SEC61BP60468 96 aaKnown RBP3.8□□□□□ -1.8
SF3B1-202ENST00000409915 HOXA4Q00056 320 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms