RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 J3QRK9 145 aa13.71□□□□□ -0.21
UPK3A-202ENST00000396082 SPDEFO95238 335 aa13.71□□□□□ -0.21
UPK3A-202ENST00000396082 IGKV1-16P04430 117 aa13.71□□□□□ -0.21
UPK3A-202ENST00000396082 MYCNOSP40205 109 aa13.71□□□□□ -0.21
UPK3A-202ENST00000396082 THBS3P49746 956 aa13.71□□□□□ -0.21
UPK3A-202ENST00000396082 ZNF660Q6AZW8 331 aaPredicted RBP13.71□□□□□ -0.21
UPK3A-202ENST00000396082 RCC1LQ96I51 464 aaKnown RBP13.71□□□□□ -0.21
UPK3A-202ENST00000396082 A3GALT2U3KPV4 340 aa13.71□□□□□ -0.21
UPK3A-202ENST00000396082 NOTCH3Q9UM47 2321 aa13.71□□□□□ -0.21
UPK3A-202ENST00000396082 SSX5O60225 188 aa13.7□□□□□ -0.22
UPK3A-202ENST00000396082 NFYAP23511 347 aaPredicted RBP13.7□□□□□ -0.22
UPK3A-202ENST00000396082 RAB25P57735 213 aa13.7□□□□□ -0.22
UPK3A-202ENST00000396082 ARPC4P59998 168 aa13.7□□□□□ -0.22
UPK3A-202ENST00000396082 CX3CL1P78423 397 aa13.7□□□□□ -0.22
UPK3A-202ENST00000396082 PSG5Q15238 335 aa13.7□□□□□ -0.22
UPK3A-202ENST00000396082 RTL8BQ17RB0 113 aa13.7□□□□□ -0.22
UPK3A-202ENST00000396082 KPRPQ5T749 579 aaPredicted RBP13.7□□□□□ -0.22
UPK3A-202ENST00000396082 CNIH2Q6PI25 160 aa13.7□□□□□ -0.22
UPK3A-202ENST00000396082 ETV3LQ6ZN32 361 aa13.7□□□□□ -0.22
UPK3A-202ENST00000396082 MRPL41Q8IXM3 137 aaKnown RBP13.7□□□□□ -0.22
UPK3A-202ENST00000396082 LINC00482Q8N8I6 264 aa13.7□□□□□ -0.22
UPK3A-202ENST00000396082 RNF152Q8N8N0 203 aa13.7□□□□□ -0.22
UPK3A-202ENST00000396082 ANXA10Q9UJ72 324 aa13.7□□□□□ -0.22
UPK3A-202ENST00000396082 FCN1O00602 326 aa13.69□□□□□ -0.22
UPK3A-202ENST00000396082 SLC25A17O43808 307 aa13.69□□□□□ -0.22
UPK3A-202ENST00000396082 DUS4LO95620 317 aaKnown RBP13.69□□□□□ -0.22
UPK3A-202ENST00000396082 CA2P00918 260 aa13.69□□□□□ -0.22
UPK3A-202ENST00000396082 PRB2P02812 416 aaPredicted RBP13.69□□□□□ -0.22
UPK3A-202ENST00000396082 PSMB8P28062 276 aa13.69□□□□□ -0.22
UPK3A-202ENST00000396082 RPS19P39019 145 aaKnown RBP13.69□□□□□ -0.22
UPK3A-202ENST00000396082 CDX1P47902 265 aaPredicted RBP13.69□□□□□ -0.22
UPK3A-202ENST00000396082 LUMP51884 338 aaPredicted RBP13.69□□□□□ -0.22
UPK3A-202ENST00000396082 NDPQ00604 133 aa13.69□□□□□ -0.22
UPK3A-202ENST00000396082 TAGLNQ01995 201 aaKnown RBP13.69□□□□□ -0.22
UPK3A-202ENST00000396082 DEFB136Q30KP8 78 aa13.69□□□□□ -0.22
UPK3A-202ENST00000396082 BVESQ8NE79 360 aa13.69□□□□□ -0.22
UPK3A-202ENST00000396082 ADTRPQ96IZ2 230 aa13.69□□□□□ -0.22
UPK3A-202ENST00000396082 HARBI1Q96MB7 349 aa13.69□□□□□ -0.22
UPK3A-202ENST00000396082 DUX3Q96PT4 197 aa13.69□□□□□ -0.22
UPK3A-202ENST00000396082 OR2W1Q9Y3N9 320 aa13.69□□□□□ -0.22
UPK3A-202ENST00000396082 A0A1W2PN81 502 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 TRIM64CA6NLI5 447 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 CCL24O00175 119 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 SHOXO15266 292 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 RRASP10301 218 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 PPIFP30405 207 aaKnown RBP13.68□□□□□ -0.22
UPK3A-202ENST00000396082 CHRNA7P36544 502 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 TMEM267Q0VDI3 215 aaPredicted RBP13.68□□□□□ -0.22
UPK3A-202ENST00000396082 UBE2NLQ5JXB2 153 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 REC114Q7Z4M0 266 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 ZNF645Q8N7E2 425 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 SAMD12Q8N8I0 201 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 BEST4Q8NFU0 473 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 S100A16Q96FQ6 103 aaKnown RBP13.68□□□□□ -0.22
UPK3A-202ENST00000396082 C5orf30Q96GV9 206 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 FAM103A1Q9BTL3 118 aaKnown RBP13.68□□□□□ -0.22
UPK3A-202ENST00000396082 FUNDC2Q9BWH2 189 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 NECAP2Q9NVZ3 263 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 FBXO7Q9Y3I1 522 aa13.68□□□□□ -0.22
UPK3A-202ENST00000396082 LGALS7P47929 136 aa13.67□□□□□ -0.22
UPK3A-202ENST00000396082 NCS1P62166 190 aa13.67□□□□□ -0.22
UPK3A-202ENST00000396082 FOXB2Q5VYV0 432 aa13.67□□□□□ -0.22
UPK3A-202ENST00000396082 UNQ5815/PRO19632Q6UWF5 114 aa13.67□□□□□ -0.22
UPK3A-202ENST00000396082 PPP1R27Q86WC6 154 aa13.67□□□□□ -0.22
UPK3A-202ENST00000396082 TCTEX1D1Q8N7M0 179 aa13.67□□□□□ -0.22
UPK3A-202ENST00000396082 C4orf3Q8WVX3 66 aa13.67□□□□□ -0.22
UPK3A-202ENST00000396082 DPF1Q92782 380 aa13.67□□□□□ -0.22
UPK3A-202ENST00000396082 RAX2Q96IS3 184 aa13.67□□□□□ -0.22
UPK3A-202ENST00000396082 P2RX4Q99571 388 aa13.67□□□□□ -0.22
UPK3A-202ENST00000396082 MCRIP2Q9BUT9 160 aaKnown RBP13.67□□□□□ -0.22
UPK3A-202ENST00000396082 GPR61Q9BZJ8 451 aa13.67□□□□□ -0.22
UPK3A-202ENST00000396082 AUNIPQ9H7T9 357 aa13.67□□□□□ -0.22
UPK3A-202ENST00000396082 FOXA2Q9Y261 457 aaPredicted RBP13.67□□□□□ -0.22
UPK3A-202ENST00000396082 SLC22A5O76082 557 aa13.66□□□□□ -0.22
UPK3A-202ENST00000396082 CNIH1O95406 144 aa13.66□□□□□ -0.22
UPK3A-202ENST00000396082 FCER2P06734 321 aa13.66□□□□□ -0.22
UPK3A-202ENST00000396082 DUTP33316 252 aaKnown RBP13.66□□□□□ -0.22
UPK3A-202ENST00000396082 GNB1P62873 340 aa13.66□□□□□ -0.22
UPK3A-202ENST00000396082 TMEM69Q5SWH9 247 aa13.66□□□□□ -0.22
UPK3A-202ENST00000396082 ZNF562Q6V9R5 426 aa13.66□□□□□ -0.22
UPK3A-202ENST00000396082 GVQW1Q8N7I0 195 aa13.66□□□□□ -0.22
UPK3A-202ENST00000396082 GRPEL2Q8TAA5 225 aa13.66□□□□□ -0.22
UPK3A-202ENST00000396082 ARPC1AQ92747 370 aa13.66□□□□□ -0.22
UPK3A-202ENST00000396082 KLK15Q9H2R5 256 aa13.66□□□□□ -0.22
UPK3A-202ENST00000396082 IFT46Q9NQC8 304 aa13.66□□□□□ -0.22
UPK3A-202ENST00000396082 TPSG1Q9NRR2 321 aa13.66□□□□□ -0.22
UPK3A-202ENST00000396082 XRCC3O43542 346 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 TUSC2O75896 110 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 CRYZL1O95825 349 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 IGLV1-40P01703 118 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 HLA-DQB1P01920 261 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 PTHLHP12272 177 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 CD40LGP29965 261 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 CBX5P45973 191 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 RAB9AP51151 201 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 CRIP2P52943 208 aaPredicted RBP13.65□□□□□ -0.22
UPK3A-202ENST00000396082 VBP1P61758 197 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 FXYD3Q14802 87 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 VMA21Q3ZAQ7 101 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 TMEM177Q53S58 311 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms