RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 HNF4GQ14541 408 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 SMN1Q16637 294 aaKnown RBP4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 ACTBL2Q562R1 376 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 FAM131AQ6UXB0 335 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 OR13C5Q8NGS8 318 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 PECRQ9BY49 303 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 RAB22AQ9UL26 194 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 ZNF257Q9Y2Q1 563 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 WSB1Q9Y6I7 421 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 C13orf42A0A1B0GVH6 325 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 TRIM64CA6NLI5 447 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 MYL12BO14950 172 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 IGHV4-30-4P0DP06 118 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 MYF6P23409 242 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 ARFRP1Q13795 201 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 POU2AF1Q16633 256 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 ACSM3Q53FZ2 586 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 GPHB5Q86YW7 130 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 JAGN1Q8N5M9 183 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 ADAD2Q8NCV1 583 aaKnown RBP4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 PEF1Q9UBV8 284 aaKnown RBP4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 AK3Q9UIJ7 227 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 TRAV39A0A0B4J263 110 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 A0A1W2PN81 502 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 MFNGO00587 321 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 ARL6IP5O75915 188 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 CA2P00918 260 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 CTXN2P0C2S0 81 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 ZNF735P0CB33 412 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 CHRNA7P36544 502 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 SLURP1P55000 103 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 CDK10Q15131 360 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 TATDN3Q17R31 274 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 H1FOOQ8IZA3 346 aaPredicted RBP4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 PUSL1Q8N0Z8 303 aaKnown RBP4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 OR10V1Q8NGI7 309 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 NEK7Q8TDX7 302 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 KCTD12Q96CX2 325 aaKnown RBP4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 OR4C12Q96R67 309 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 METTL1Q9UBP6 276 aaKnown RBP4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 LINC00527Q9UJ94 153 aa4.74□□□□□ -1.65
SMARCAD1-203ENST00000394961 IGKV1-6A0A0C4DH72 117 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 SAP30O75446 220 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 IFNA6P05013 189 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 HIST1H1BP16401 226 aaKnown RBP4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 TMEM50BP56557 158 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 HSD17B12Q53GQ0 312 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 FAM53AQ6NSI3 398 aaPredicted RBP4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 MARC2Q969Z3 335 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 ABHD14BQ96IU4 210 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 ACOT13Q9NPJ3 140 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 AASSQ9UDR5 926 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 KIR2DS2P43631 304 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 OR3A3P47888 321 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 LTC4SQ16873 150 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 UNQ5815/PRO19632Q6UWF5 114 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 TMEM91Q6ZNR0 172 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 DUX3Q96PT4 197 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 FBXL15Q9H469 300 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 BANF2Q9H503 90 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 FAM212BQ9NTI7 297 aaPredicted RBP4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 UBE2QL1A1L167 161 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 RBFOX2O43251 390 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 OR9G9P0C7N8 305 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 CBX3Q13185 183 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 ZBTB34Q8NCN2 500 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 FAAP24Q9BTP7 215 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 ZNF436Q9C0F3 470 aaPredicted RBP4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 DCSTAMPQ9H295 470 aa4.73□□□□□ -1.65
SMARCAD1-203ENST00000394961 PDCD5O14737 125 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 HLA-DQB1P01920 261 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 TPPP2P59282 170 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 FXYD3Q14802 87 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 SPHARQ15513 63 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 PRSS8Q16651 343 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 UFD1Q92890 307 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 AIFM2Q9BRQ8 373 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 HIPK2Q9H2X6 1198 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 A0A0A6YYH2 397 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 A6NJ64 397 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 FCN1O00602 326 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 FCGR3AP08637 254 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 DUTP33316 252 aaKnown RBP4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 TBCEQ15813 527 aaPredicted RBP4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 RAB11BQ15907 218 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 HAGHQ16775 308 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 RTL8BQ17RB0 113 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 VMA21Q3ZAQ7 101 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 PRSS48Q7RTY5 328 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 C6orf201Q7Z4U5 140 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 NECAP1Q8NC96 275 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 BVESQ8NE79 360 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 TMEM167AQ8TBQ9 72 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 SNAPC3Q92966 411 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 C5orf30Q96GV9 206 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 SLC35D1Q9NTN3 355 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 SDHAF2Q9NX18 166 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 NOTCH1P46531 2555 aa4.72□□□□□ -1.65
SMARCAD1-203ENST00000394961 UBE2CO00762 179 aa4.71□□□□□ -1.65
SMARCAD1-203ENST00000394961 TUSC2O75896 110 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms