RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 MS4A6EQ96DS6 147 aa2.83□□□□□ -1.96
PHF3-202ENST00000393387 FOXB1Q99853 325 aa2.83□□□□□ -1.96
PHF3-202ENST00000393387 NTPCRQ9BSD7 190 aaKnown RBP2.83□□□□□ -1.96
PHF3-202ENST00000393387 RNASE7Q9H1E1 156 aaKnown RBP2.83□□□□□ -1.96
PHF3-202ENST00000393387 OCIAD1Q9NX40 245 aa2.83□□□□□ -1.96
PHF3-202ENST00000393387 NEXMIFQ5QGS0 1516 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 TRAV30A0A087WSZ9 112 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 TINCRA0A1B0GVN0 87 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 TMEM202A6NGA9 273 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 MALP21145 153 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 VDAC1P21796 283 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 CLDN15P56746 228 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 RPS23P62266 143 aaKnown RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 BTG2P78543 158 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 GUSBP1Q15486 140 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 PEAR1Q5VY43 1037 aaPredicted RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 SLC48A1Q6P1K1 146 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 FER1L6-AS1Q8NA97 138 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 ZNF488Q96MN9 340 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 CHAC1Q9BUX1 264 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 RBM38Q9H0Z9 239 aaKnown RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 UBE2ZQ9H832 354 aaPredicted RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 MEGF6O75095 1541 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 ARRDC5A6NEK1 342 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 TLCD2A6NGC4 264 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 TMEM250H0YL14 139 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 UBE2CO00762 179 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 GPX1P07203 203 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 PNLIPP16233 465 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 HAMPP81172 84 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 HSD52Q0P140 79 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 FOXF1Q12946 379 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 KCNMB1Q16558 191 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 KIRREL2Q6UWL6 708 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 LRP10Q7Z4F1 713 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 SYS1Q8N2H4 156 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 GATAD1Q8WUU5 269 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 KIR2DL4Q99706 377 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 HIST1H2BLQ99880 126 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 ATP7AQ04656 1500 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 IGHV3OR16-8A0A075B7F1 116 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 IGHV1OR21-1A0A087WYE8 117 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 GAGE12HA6NDE8 117 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 PPIHO43447 177 aaKnown RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 CD5LO43866 347 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 MOSP00540 346 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 HOXC4P09017 264 aaPredicted RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 HTN3P15516 51 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 RPL27AP46776 148 aaKnown RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 RND2P52198 227 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 UCNP55089 124 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 IGFBP7Q16270 282 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 VAX1Q5SQQ9 334 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 TMEM207Q6UWW9 146 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 TCF24Q7RTU0 167 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 ARIH2OSQ8N7S6 290 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 TPRX1Q8N7U7 411 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 DLX4Q92988 240 aaPredicted RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 TUBA4BQ9H853 241 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 SIRT4Q9Y6E7 314 aaPredicted RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 CXorf51AA0A1B0GTR3 108 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 K7ERJ3 54 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 AGFG2O95081 481 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 SELLP14151 372 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 TNFRSF1AP19438 455 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 CEACAM8P31997 349 aaPredicted RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 RNASE4P34096 147 aaKnown RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 ID1P41134 155 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 PFN3P60673 137 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 RPL8P62917 257 aaKnown RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 DUSP28Q4G0W2 176 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 MORN5Q5VZ52 161 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 UMODL1-AS1Q8N2C9 162 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 CD99L2Q8TCZ2 262 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 COQ2Q96H96 371 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 IGSF21Q96ID5 467 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 C2orf88Q9BSF0 95 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 MS4A8Q9BY19 250 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 OR2H1Q9GZK4 316 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 IL36BQ9NZH7 164 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 TMEFF2Q9UIK5 374 aaPredicted RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 NEURL4Q96JN8 1562 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 CEACAM18A8MTB9 384 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 A8MWP6 167 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 AHRRA9YTQ3 701 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 LINC01387J3KSC0 135 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 GFRA3O60609 400 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 HIST1H2BKO60814 126 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 SS18L1O75177 396 aaPredicted RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 HYPMO75409 117 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 VENTXO95231 258 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 HIST1H2BJP06899 126 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 CXCL1P09341 107 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 HIST1H2BOP23527 126 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 DNMT1P26358 1616 aaKnown RBP2.82□□□□□ -1.96
PHF3-202ENST00000393387 HIST1H2BBP33778 126 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 HIST1H2BDP58876 126 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 HIST1H2BCP62807 126 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 IRF3Q14653 427 aa2.82□□□□□ -1.96
PHF3-202ENST00000393387 HIST2H2BEQ16778 126 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms