RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PAXXQ9BUH6 204 aa16.96■□□□□ 0.31
SHANK1-203ENST00000391813 DLL1O00548 723 aa16.96■□□□□ 0.31
SHANK1-203ENST00000391813 LHFPL6Q9Y693 200 aa16.96■□□□□ 0.31
SHANK1-203ENST00000391813 PRR33A8MZF0 331 aa16.96■□□□□ 0.31
SHANK1-203ENST00000391813 SMIM10L1P0DMW3 83 aa16.96■□□□□ 0.31
SHANK1-203ENST00000391813 OR1L8Q8NGR8 309 aa16.96■□□□□ 0.31
SHANK1-203ENST00000391813 SMIM10Q96HG1 83 aa16.96■□□□□ 0.31
SHANK1-203ENST00000391813 LOC390937A0A1W2PQ73 354 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 HIST1H2BKO60814 126 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 HIST1H2BJP06899 126 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 HIST1H2BOP23527 126 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 ACP1P24666 158 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 HIST1H2BBP33778 126 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 ZNF137PP52743 207 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 HIST1H2BDP58876 126 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 HIST1H2BCP62807 126 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 TNFRSF9Q07011 255 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 UNC119Q13432 240 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 HIST2H2BEQ16778 126 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.96■□□□□ 0.3
SHANK1-203ENST00000391813 HIST1H2BHQ93079 126 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 HIST1H2BNQ99877 126 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 HIST1H2BMQ99879 126 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 AUP1Q9Y679 476 aa16.96■□□□□ 0.3
SHANK1-203ENST00000391813 TRAV9-1A0A075B6T8 112 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 J3QR06 171 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 ADRA2AP08913 450 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 RPL7P18124 248 aaKnown RBP16.95■□□□□ 0.3
SHANK1-203ENST00000391813 NMUP48645 174 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 TMPRSS3P57727 454 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 HEPN1Q6WQI6 88 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 SCARF2Q96GP6 870 aaPredicted RBP16.95■□□□□ 0.3
SHANK1-203ENST00000391813 TMEM238LA0A1B0GVL6 79 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 A6NJY4 79 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 SELENOTP62341 195 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 OR8B3Q8NGG8 313 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 UCN2Q96RP3 112 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 IGHMP01871 453 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 MPZP25189 248 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 RELBQ01201 579 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 GAB4Q2WGN9 574 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 MYOZ3Q8TDC0 251 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 ZNF385AQ96PM9 386 aaKnown RBP16.95■□□□□ 0.3
SHANK1-203ENST00000391813 ABHD14AQ9BUJ0 271 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 DNAJC13O75165 2243 aa16.95■□□□□ 0.3
SHANK1-203ENST00000391813 TRAV39A0A0B4J263 110 aa16.94■□□□□ 0.3
SHANK1-203ENST00000391813 A0A1B0GV72 72 aa16.94■□□□□ 0.3
SHANK1-203ENST00000391813 MEX3AA1L020 520 aaKnown RBP16.94■□□□□ 0.3
SHANK1-203ENST00000391813 CD5P06127 495 aa16.94■□□□□ 0.3
SHANK1-203ENST00000391813 SOX8P57073 446 aa16.94■□□□□ 0.3
SHANK1-203ENST00000391813 KLF7O75840 302 aaPredicted RBP16.94■□□□□ 0.3
SHANK1-203ENST00000391813 COMPP49747 757 aaPredicted RBP16.94■□□□□ 0.3
SHANK1-203ENST00000391813 OR2J1Q9GZK6 312 aa16.94■□□□□ 0.3
SHANK1-203ENST00000391813 RAMP1O60894 148 aa16.94■□□□□ 0.3
SHANK1-203ENST00000391813 SRSF3P84103 164 aaKnown RBP16.93■□□□□ 0.3
SHANK1-203ENST00000391813 ERASQ7Z444 233 aa16.93■□□□□ 0.3
SHANK1-203ENST00000391813 CLDND2Q8NHS1 167 aa16.93■□□□□ 0.3
SHANK1-203ENST00000391813 SAXO1Q8IYX7 474 aa16.93■□□□□ 0.3
SHANK1-203ENST00000391813 RTBDNQ9BSG5 229 aaPredicted RBP16.93■□□□□ 0.3
SHANK1-203ENST00000391813 TMEM170AQ8WVE7 144 aa16.93■□□□□ 0.3
SHANK1-203ENST00000391813 SLC25A28Q96A46 364 aa16.93■□□□□ 0.3
SHANK1-203ENST00000391813 SPOCK3Q9BQ16 436 aa16.93■□□□□ 0.3
SHANK1-203ENST00000391813 C4orf51C9J302 202 aa16.93■□□□□ 0.3
SHANK1-203ENST00000391813 MS4A18H0YCH9 400 aa16.93■□□□□ 0.3
SHANK1-203ENST00000391813 UQCRFS1P47985 274 aa16.93■□□□□ 0.3
SHANK1-203ENST00000391813 MS4A18Q3C1V0 323 aa16.93■□□□□ 0.3
SHANK1-203ENST00000391813 RPEQ96AT9 228 aa16.93■□□□□ 0.3
SHANK1-203ENST00000391813 TCTAP57738 103 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 SLC35E4Q6ICL7 350 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 NIT1Q86X76 327 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 GBGT1Q8N5D6 347 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 FLYWCH2Q96CP2 140 aaKnown RBP16.92■□□□□ 0.3
SHANK1-203ENST00000391813 SFXN3Q9BWM7 321 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 PIKFYVEQ9Y2I7 2098 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 K7ESF4 209 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 S1PR2O95136 353 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 IL36RNQ9UBH0 155 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 FBLN5Q9UBX5 448 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 CEACAM1P13688 526 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 MAS1LP35410 378 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 TNFSF10P50591 281 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 C19orf24Q9BVV8 132 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 CNOT1A5YKK6 2376 aaKnown RBP16.92■□□□□ 0.3
SHANK1-203ENST00000391813 TRAV38-1A0A0B4J264 116 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 J3QRE1 110 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 CLDN14O95500 239 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 LINC00869P0C866 280 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 CBLN1P23435 193 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 ZNF645Q8N7E2 425 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 RND1Q92730 232 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 TMEM70Q9BUB7 260 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 CACNA1IQ9P0X4 2223 aa16.92■□□□□ 0.3
SHANK1-203ENST00000391813 LIFP15018 202 aa16.91■□□□□ 0.3
SHANK1-203ENST00000391813 GAS1P54826 345 aa16.91■□□□□ 0.3
SHANK1-203ENST00000391813 CLDN18P56856 261 aa16.91■□□□□ 0.3
SHANK1-203ENST00000391813 TM2D1Q9BX74 207 aa16.91■□□□□ 0.3
SHANK1-203ENST00000391813 SAPCD1Q5SSQ6 148 aa16.91■□□□□ 0.3
SHANK1-203ENST00000391813 SPINK14Q6IE38 97 aa16.91■□□□□ 0.3
SHANK1-203ENST00000391813 EP300Q09472 2414 aaPredicted RBP16.91■□□□□ 0.3
SHANK1-203ENST00000391813 CA7P43166 264 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms