RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 Q6ZS49 121 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 LINC00596Q86U02 117 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 RPP25LQ8N5L8 163 aaKnown RBP10.86□□□□□ -0.67
USP11-204ENST00000377107 ZNRF1Q8ND25 227 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 IL22RA2Q969J5 263 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 ZNF251Q9BRH9 671 aa10.86□□□□□ -0.67
USP11-204ENST00000377107 TRAV38-1A0A0B4J264 116 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 CLDN34H7C241 214 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 SMIM6P0DI80 62 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 CDPF1Q6NVV7 123 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 C9orf106Q8NAJ2 232 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 SPRY4Q9C004 299 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 PRO1933Q9H354 126 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 METTL1Q9UBP6 276 aaKnown RBP10.85□□□□□ -0.67
USP11-204ENST00000377107 A0A1W2PPV4 95 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 SPINT2O43291 252 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 TNFSF10P50591 281 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 ZNF718Q3SXZ3 478 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 Q6ZR03 302 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 TMEM37Q8WXS4 190 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 TCEAL7Q9BRU2 100 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 IGKV1D-33P01593 117 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 IGKV1-33P01594 117 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 CECR9P0C854 216 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 LRRC75BQ2VPJ9 315 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 TMEM41BQ5BJD5 291 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 ACSM6Q6P461 480 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 LRP11Q86VZ4 500 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 OR5B12Q96R08 314 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 TUBA4BQ9H853 241 aa10.85□□□□□ -0.67
USP11-204ENST00000377107 TRGC1P0CF51 173 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 SELLP14151 372 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 GABRA6Q16445 453 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 RPL39P5Q59GN2 51 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 OR4A16Q8NH70 328 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 FRZBQ92765 325 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 VAX2Q9UIW0 290 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 ABCA4P78363 2273 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 H7BYZ3 331 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 SLC25A6P12236 298 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 ZNF645Q8N7E2 425 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 SSMEM1Q8WWF3 244 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 LSM10Q969L4 123 aaKnown RBP10.84□□□□□ -0.67
USP11-204ENST00000377107 GGACTQ9BVM4 153 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 EGLN1Q9GZT9 426 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 MED13LQ71F56 2210 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 TNCP24821 2201 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 OOEPA6NGQ2 149 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 LINC00473A8K010 186 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 HIST1H2BKO60814 126 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 HIST1H2BJP06899 126 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 HIST1H2BOP23527 126 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 HIST1H2BBP33778 126 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 HIST1H2BDP58876 126 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 HIST1H2BCP62807 126 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 HIST2H2BEQ16778 126 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.84□□□□□ -0.67
USP11-204ENST00000377107 OR8G5Q8NG78 346 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 HIST1H2BHQ93079 126 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 WFIKKN1Q96NZ8 548 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 HIST1H2BNQ99877 126 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 HIST1H2BMQ99879 126 aa10.84□□□□□ -0.67
USP11-204ENST00000377107 YLPM1P49750 1951 aaKnown RBP10.83□□□□□ -0.67
USP11-204ENST00000377107 GNG10P50151 68 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 SMIM21Q3B7S5 101 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 C16orf82Q7Z2V1 217 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 ZNF383Q8NA42 475 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 OR51G1Q8NGK1 321 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 RAB24Q969Q5 203 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 R3HDM4Q96D70 268 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 COQ2Q96H96 371 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 QTRT1Q9BXR0 403 aaKnown RBP10.83□□□□□ -0.68
USP11-204ENST00000377107 LRRC30A6NM36 301 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 TMEM241Q24JQ0 296 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 PDLIM3Q53GG5 364 aaPredicted RBP10.83□□□□□ -0.68
USP11-204ENST00000377107 FAM209BQ5JX69 171 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 FAM90A2PQ658T7 463 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 MOGAT3Q86VF5 341 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 ELOVL1Q9BW60 279 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 CXXC4Q9H2H0 198 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 PGPEP1LA6NFU8 196 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 MARCH11A6NNE9 402 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 ZNF705GA8MUZ8 300 aaPredicted RBP10.83□□□□□ -0.68
USP11-204ENST00000377107 COL8A2P25067 703 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 MEF2BQ02080 365 aaPredicted RBP10.83□□□□□ -0.68
USP11-204ENST00000377107 WDR82Q6UXN9 313 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 MRGPRGQ86SM5 289 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 ABHD12Q8N2K0 398 aa10.83□□□□□ -0.68
USP11-204ENST00000377107 COX5AP20674 150 aa10.82□□□□□ -0.68
USP11-204ENST00000377107 PRDX2P32119 198 aa10.82□□□□□ -0.68
USP11-204ENST00000377107 ACP7Q6ZNF0 438 aa10.82□□□□□ -0.68
USP11-204ENST00000377107 Q6ZT83 130 aa10.82□□□□□ -0.68
USP11-204ENST00000377107 SLC35E3Q7Z769 313 aa10.82□□□□□ -0.68
USP11-204ENST00000377107 FAM3BP58499 235 aaPredicted RBP10.82□□□□□ -0.68
USP11-204ENST00000377107 ERVK-16P61578 105 aa10.82□□□□□ -0.68
USP11-204ENST00000377107 BSXQ3C1V8 233 aa10.82□□□□□ -0.68
USP11-204ENST00000377107 OR13D1Q8NGV5 346 aa10.82□□□□□ -0.68
USP11-204ENST00000377107 PINX1Q96BK5 328 aaKnown RBP10.82□□□□□ -0.68
USP11-204ENST00000377107 TMEM147Q9BVK8 224 aa10.82□□□□□ -0.68
USP11-204ENST00000377107 ACTR3CQ9C0K3 210 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms