RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.58□□□□□ -0.71
TNFRSF1A-202ENST00000366159 FOXA2Q9Y261 457 aaPredicted RBP10.58□□□□□ -0.71
TNFRSF1A-202ENST00000366159 A0A1W2PN81 502 aa10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 SEC14L6B5MCN3 397 aa10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 IGLV2-23P01705 113 aa10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 MYL9P24844 172 aa10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 CHRNA7P36544 502 aa10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ECSCRQ19T08 205 aa10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 VAX1Q5SQQ9 334 aa10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 C11orf87Q6NUJ2 197 aa10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 TSNAXQ99598 290 aaKnown RBP10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ALX4Q9H161 411 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 TXNL4BQ9NX01 149 aaKnown RBP10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 SDHAF2Q9NX18 166 aa10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 METTL1Q9UBP6 276 aaKnown RBP10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ZNF230Q9UIE0 474 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ELF5Q9UKW6 265 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF1A-202ENST00000366159 IGKV1D-8A0A087WSZ0 117 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ARPC1BO15143 372 aaKnown RBP10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 BET1O15155 118 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 CA2P00918 260 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 OR8U9P0C7N5 309 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 GADD45AP24522 165 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 INSL3P51460 131 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 RPS16P62249 146 aaKnown RBP10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 TMEM267Q0VDI3 215 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 DCTN2Q13561 401 aaKnown RBP10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 PLGLAQ15195 96 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 MRGPRG-AS1Q2M3A8 158 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ZNF260Q3ZCT1 412 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 PYHIN1Q6K0P9 492 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 PPP1R27Q86WC6 154 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 LFNGQ8NES3 379 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 OR10J5Q8NHC4 309 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 CASTOR1Q8WTX7 329 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 MAFIPQ8WZ33 124 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 FLYWCH2Q96CP2 140 aaKnown RBP10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 RHOVQ96L33 236 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 OR5B12Q96R08 314 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 CLCC1Q96S66 551 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 FAM103A1Q9BTL3 118 aaKnown RBP10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 YTHDF1Q9BYJ9 559 aaKnown RBP10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 OR2D2Q9H210 308 aa10.57□□□□□ -0.72
TNFRSF1A-202ENST00000366159 METTL21EPA6NDL7 271 aa10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 NOTOA8MTQ0 251 aa10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 M0R1X1 148 aa10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 LGALS1P09382 135 aaKnown RBP10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 LGALS7P47929 136 aa10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 MRPS15P82914 257 aaKnown RBP10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 TMEM177Q53S58 311 aa10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ACTBL2Q562R1 376 aa10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 H1FOOQ8IZA3 346 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 DDB2Q92466 427 aa10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 DCUN1D4Q92564 292 aa10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 DLX4Q92988 240 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 SLC35D1Q9NTN3 355 aa10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 A3GALT2U3KPV4 340 aa10.56□□□□□ -0.72
TNFRSF1A-202ENST00000366159 HUWE1Q7Z6Z7 4374 aaKnown RBP10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 SRRM4A7MD48 611 aaKnown RBP10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 SLC25A17O43808 307 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 BRI3O95415 125 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 APOA2P02652 100 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 DTYMKP23919 212 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ECI1P42126 302 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 TAGLNQ01995 201 aaKnown RBP10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 CD69Q07108 199 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 PJVKQ0ZLH3 352 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ARL6IP1Q15041 203 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 CDNFQ49AH0 187 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 UNQ5815/PRO19632Q6UWF5 114 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 TPRA1Q86W33 373 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 FCGR1BQ92637 280 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 PRR25Q96S07 402 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 CENPOQ9BU64 300 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 STUB1Q9UNE7 303 aa10.55□□□□□ -0.72
TNFRSF1A-202ENST00000366159 RYR3Q15413 4870 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 NBEAL2Q6ZNJ1 2754 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 A0A075B6Q4 140 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 IGHV4OR15-8A0A075B7B6 117 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 A0A087WW49 117 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 SMIM30A4D0T7 59 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 LINC01619G3V211 115 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 OVOL1O14753 267 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 SLURP1P55000 103 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 FXYD3Q14802 87 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 HACD4Q5VWC8 232 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ZNF429Q86V71 674 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ARPC1AQ92747 370 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ATG5Q9H1Y0 275 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 SLA2Q9H6Q3 261 aa10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ZNF256Q9Y2P7 627 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF1A-202ENST00000366159 DNAH7Q8WXX0 4024 aa10.53□□□□□ -0.72
TNFRSF1A-202ENST00000366159 LINC00473A8K010 186 aa10.53□□□□□ -0.72
TNFRSF1A-202ENST00000366159 H3BUA1 57 aa10.53□□□□□ -0.72
TNFRSF1A-202ENST00000366159 PSMB9P28065 219 aa10.53□□□□□ -0.72
TNFRSF1A-202ENST00000366159 DUTP33316 252 aaKnown RBP10.53□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ARFRP1Q13795 201 aa10.53□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ACSM6Q6P461 480 aa10.53□□□□□ -0.72
TNFRSF1A-202ENST00000366159 ZNF773Q6PK81 442 aa10.53□□□□□ -0.72
TNFRSF1A-202ENST00000366159 BVESQ8NE79 360 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms