RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 ATP5G3P48201 142 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 FOXA1P55317 472 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 SEC61BP60468 96 aaKnown RBP4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 SEC61A1P61619 476 aaKnown RBP4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 HGFACQ04756 655 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 GSG1Q2KHT4 349 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 TMEM30BQ3MIR4 351 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 VMA21Q3ZAQ7 101 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 FAM153CQ494X1 144 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 RNASE12Q5GAN4 147 aaKnown RBP4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 DNAJC24Q6P3W2 148 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 IGFL2Q6UWQ7 119 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 ZNF793Q6ZN11 406 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 OR4C16Q8NGL9 310 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 ZNF564Q8TBZ8 553 aaPredicted RBP4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 C10orf82Q8WW14 230 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 RTN4IP1Q8WWV3 396 aaPredicted RBP4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 SLC25A21Q9BQT8 299 aaPredicted RBP4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 MDFICQ9P1T7 246 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 TPRKBQ9Y3C4 175 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 MPC1Q9Y5U8 109 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 HEBP2Q9Y5Z4 205 aa4.32□□□□□ -1.72
RNU6-249P-201ENST00000363016 DISP1Q96F81 1524 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 A0A0G2JK05 382 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 CCDC179H3BU77 68 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 H7C1H1 209 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 SLC17A2O00624 439 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 WISP2O76076 250 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 IGKV1D-16P01601 117 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 SEC11BP0C7V7 166 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 P0DMU3 169 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 FAM231AP0DMU4 169 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 FAM231CP0DMU5 169 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 CD1DP15813 335 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 TMEM258P61165 79 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 EIF3IQ13347 325 aaKnown RBP4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 ZNF146Q15072 292 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 FKBP1CQ5VVH2 108 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 PIP4P1Q86T03 277 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 ZNF429Q86V71 674 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 ZNF441Q8N8Z8 693 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 OR1J1Q8NGS3 322 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 OR1L3Q8NH93 324 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 FRZBQ92765 325 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 ZNF501Q96CX3 271 aaPredicted RBP4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 BORCS8Q96FH0 119 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 PEBP4Q96S96 227 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 NMNAT3Q96T66 252 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 SOSTQ9BQB4 213 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 SNRNP25Q9BV90 132 aaKnown RBP4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 C19orf24Q9BVV8 132 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 RTL8AQ9BWD3 113 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 TVP23BQ9NYZ1 205 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 SLAMF8Q9P0V8 285 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 FIS1Q9Y3D6 152 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 CDC42BPAQ5VT25 1732 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 ABCA3Q99758 1704 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 TRPM3Q9HCF6 1732 aaPredicted RBP4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 MYH6P13533 1939 aa4.31□□□□□ -1.72
RNU6-249P-201ENST00000363016 SBF1O95248 1867 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 BLMP54132 1417 aaPredicted RBP4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 LTN1O94822 1766 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 CAMTA1Q9Y6Y1 1673 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 A0A087X0T9 212 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 TRAV4A0A0B4J268 109 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 LOC107984640A0A0U1RRK4 108 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 FAM220BPB1ANY3 271 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 TMEM262E9PQX1 116 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 HAX1O00165 279 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 NPIPB7O75200 414 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 PDCD6O75340 191 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 GABARAPO95166 117 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 KRASP01116 189 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 OR9G9P0C7N8 305 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 CTSEP14091 401 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 GADD45AP24522 165 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 MPGP29372 298 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 DRD3P35462 400 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 SRP14P37108 136 aaKnown RBP4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 INPP1P49441 399 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 PLGLB1Q02325 96 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 TMEM187Q14656 261 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 MSMO1Q15800 293 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 RTL8BQ17RB0 113 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 COA6Q5JTJ3 125 aaKnown RBP4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 PAGE3Q5JUK9 113 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 FAM120AOSQ5T036 256 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 ATP1A1-AS1Q5TC04 95 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 Q5XG85 94 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 UFSP1Q6NVU6 142 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 Q6ZN92 141 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 Q6ZRU5 148 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 SLC25A45Q8N413 288 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 OR10J6PQ8NGY7 276 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 SSC4DQ8WTU2 575 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 TWIST2Q8WVJ9 160 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 COPS9Q8WXC6 57 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 RAB37Q96AX2 223 aa4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 NAA38Q9BRA0 125 aaKnown RBP4.3□□□□□ -1.72
RNU6-249P-201ENST00000363016 EIF5A2Q9GZV4 153 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms