RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 IFITM10A6NMD0 228 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 IBA57Q5T440 356 aaKnown RBP13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 RIF1Q5UIP0 2472 aaKnown RBP13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 C12orf54Q6X4T0 127 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 WNT10AQ9GZT5 417 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 HIF1ANQ9NWT6 349 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 IL3RAP26951 378 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 TFPI2P48307 235 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 SAP30LQ9HAJ7 183 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 R4GN57 208 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 VWA8A3KMH1 1905 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 ISLRO14498 428 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 OR4A8P0C604 315 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 DEFA4P12838 97 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 FXYD3Q14802 87 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 EGLN1Q9GZT9 426 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 DLL3Q9NYJ7 618 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 TBL2Q9Y4P3 447 aaKnown RBP13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 HEATR5AQ86XA9 2040 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 TMEM265A0A087WTH1 108 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 CEACAM1P13688 526 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 CFPP27918 469 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 OPRK1P41145 380 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 PPOXP50336 477 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 PQLC2Q6ZP29 291 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 RNF144BQ7Z419 303 aa13.68□□□□□ -0.22
CLSTN1-201ENST00000361311 SMPD2O60906 423 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 CPEB3Q8NE35 698 aaKnown RBP13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 TNS1Q9HBL0 1735 aaKnown RBP13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 TANC1Q9C0D5 1861 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 A6NDN8 102 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 A8MWP6 167 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 SERF1AO75920 110 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 QRFPP83859 136 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 ZNF501Q96CX3 271 aaPredicted RBP13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 WBP1Q96G27 269 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 KLHDC3Q9BQ90 382 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 PLXNA3P51805 1871 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 TRGV10A0A0A0MS01 117 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 GAGE10A6NGK3 116 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 NKX6-3A6NJ46 265 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 EREGO14944 169 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 CSN1S1P47710 185 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 PLAURQ03405 335 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 AESQ08117 197 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 C6orf15Q6UXA7 325 aaPredicted RBP13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 MRPL13Q9BYD1 178 aaKnown RBP13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 SP1P08047 785 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 HIST1H1EP10412 219 aaKnown RBP13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 C10orf128Q5T292 105 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 C1orf194Q5T5A4 169 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 TUSC5Q8IXB3 177 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 TMEM178AQ8NBL3 297 aa13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 BCL2L2Q92843 193 aaPredicted RBP13.67□□□□□ -0.22
CLSTN1-201ENST00000361311 SLC17A3O00476 420 aa13.66□□□□□ -0.22
CLSTN1-201ENST00000361311 LAMTOR2Q9Y2Q5 125 aa13.66□□□□□ -0.22
CLSTN1-201ENST00000361311 KLF13Q9Y2Y9 288 aaPredicted RBP13.66□□□□□ -0.22
CLSTN1-201ENST00000361311 TRBV9A0A0B4J1U6 114 aa13.66□□□□□ -0.22
CLSTN1-201ENST00000361311 NEURL1O76050 574 aa13.66□□□□□ -0.22
CLSTN1-201ENST00000361311 KIR2DS2P43631 304 aa13.66□□□□□ -0.22
CLSTN1-201ENST00000361311 TCF23Q7RTU1 214 aa13.66□□□□□ -0.22
CLSTN1-201ENST00000361311 OR10X1Q8NGY0 326 aa13.66□□□□□ -0.22
CLSTN1-201ENST00000361311 NCOR1O75376 2440 aa13.66□□□□□ -0.22
CLSTN1-201ENST00000361311 CRIPAKQ8N1N5 446 aa13.66□□□□□ -0.22
CLSTN1-201ENST00000361311 OR52L2PQ8NGH6 319 aa13.66□□□□□ -0.22
CLSTN1-201ENST00000361311 SP7Q8TDD2 431 aaPredicted RBP13.66□□□□□ -0.22
CLSTN1-201ENST00000361311 PPP1R14DQ9NXH3 145 aa13.66□□□□□ -0.22
CLSTN1-201ENST00000361311 ZNF891A8MT65 544 aaPredicted RBP13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 CCL1P22362 96 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 SPEM1Q8N4L4 309 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 MBD3L1Q8WWY6 194 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 RPL31P62899 125 aaKnown RBP13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 SLC25A34Q6PIV7 304 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 CALHM1Q8IU99 346 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 CADM4Q8NFZ8 388 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 OR1L4Q8NGR5 311 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 OR2T6Q8NHC8 308 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 FER1L6-AS2Q96M78 137 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 ATP5G3P48201 142 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 RNPS1Q15287 305 aaKnown RBP13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 OR1C1Q15619 314 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 KCNMB1Q16558 191 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 SSX8Q7RTT4 187 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 GBGT1Q8N5D6 347 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 CDX2Q99626 313 aaPredicted RBP13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 NPCDR1Q9BY65 106 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 VSIRQ9H7M9 311 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 COLQQ9Y215 455 aaPredicted RBP13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 C1QTNF9BB2RNN3 333 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 P01737 135 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 ADH4P08319 380 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 ZNF137PP52743 207 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 WDR74Q6RFH5 385 aaPredicted RBP13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 PDPNQ86YL7 162 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 ARL6IP6Q8N6S5 226 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 LRRC29Q8WV35 223 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 HSPB8Q9UJY1 196 aa13.65□□□□□ -0.22
CLSTN1-201ENST00000361311 FANCMQ8IYD8 2048 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 IGKV1D-13A0A0B4J2D9 117 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 IGKV1-13P0DP09 117 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms