RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 CBLN2Q8IUK8 224 aa14.64□□□□□ -0.07
NPAS3-202ENST00000356141 SPAG16Q8N0X2 631 aa14.64□□□□□ -0.07
NPAS3-202ENST00000356141 TMEM56Q96MV1 263 aa14.64□□□□□ -0.07
NPAS3-202ENST00000356141 VKORC1Q9BQB6 163 aa14.64□□□□□ -0.07
NPAS3-202ENST00000356141 TMEM56-RWDD3S4R434 201 aa14.64□□□□□ -0.07
NPAS3-202ENST00000356141 RUNX1Q01196 453 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 NMSQ5H8A3 153 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 C1orf229Q6ZS94 237 aaPredicted RBP14.63□□□□□ -0.07
NPAS3-202ENST00000356141 ELOVL5Q9NYP7 299 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 C17orf100A8MU93 164 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 E5RGE8 158 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 SPINT2O43291 252 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 MED6O75586 246 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 VDAC1P21796 283 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 TNFSF4P23510 183 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 DEFA6Q01524 100 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 UNQ6494/PRO21346Q6UXR6 183 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 FAM185AQ8N0U4 392 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 LRTM2Q8N967 370 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 SLC25A32Q9H2D1 315 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 FAM96BQ9Y3D0 163 aa14.63□□□□□ -0.07
NPAS3-202ENST00000356141 TUBAL3A6NHL2 446 aa14.62□□□□□ -0.07
NPAS3-202ENST00000356141 SIAH2O43255 324 aa14.62□□□□□ -0.07
NPAS3-202ENST00000356141 EWSR1Q01844 656 aaKnown RBP eCLIP14.62□□□□□ -0.07
NPAS3-202ENST00000356141 SRSF7Q16629 238 aaKnown RBP eCLIP14.62□□□□□ -0.07
NPAS3-202ENST00000356141 PRAMEF5Q5TYX0 476 aa14.62□□□□□ -0.07
NPAS3-202ENST00000356141 SHISA9B4DS77 424 aa14.62□□□□□ -0.07
NPAS3-202ENST00000356141 C15orf65H3BRN8 121 aa14.62□□□□□ -0.07
NPAS3-202ENST00000356141 CCL3L1P16619 93 aa14.62□□□□□ -0.07
NPAS3-202ENST00000356141 OR2B8PP59922 312 aa14.62□□□□□ -0.07
NPAS3-202ENST00000356141 ADORA2A-AS1P86434 159 aa14.62□□□□□ -0.07
NPAS3-202ENST00000356141 OR5D13Q8NGL4 314 aa14.62□□□□□ -0.07
NPAS3-202ENST00000356141 JKAMPQ9P055 326 aa14.62□□□□□ -0.07
NPAS3-202ENST00000356141 IL19Q9UHD0 177 aa14.62□□□□□ -0.07
NPAS3-202ENST00000356141 POMT1Q9Y6A1 747 aa14.62□□□□□ -0.07
NPAS3-202ENST00000356141 GOSR1O95249 250 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 CLDN1O95832 211 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 BRWD1-AS2P59051 145 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 NCR3LG1Q68D85 454 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 OR2C3Q8N628 320 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 WNK2Q9Y3S1 2297 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 MALRD1Q5VYJ5 2156 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 K7N7A8 449 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 M0R1X1 148 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 FCGR3BO75015 233 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 UCNP55089 124 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 MZT1Q08AG7 82 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 OR5C1Q8NGR4 320 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 GAFA1Q96PS6 74 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 ABHD14AQ9BUJ0 271 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 NCOR1P1Q9H4R4 102 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 PLEKHF2Q9H8W4 249 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 LHBP01229 141 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 METTL15P1P0C7V9 234 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 LYL1P12980 280 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 CA7P43166 264 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 RND3P61587 244 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 ZNF616Q08AN1 781 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 ZNF645Q8N7E2 425 aa14.61□□□□□ -0.07
NPAS3-202ENST00000356141 CISD1Q9NZ45 108 aaKnown RBP14.61□□□□□ -0.07
NPAS3-202ENST00000356141 MGST3O14880 152 aa14.6□□□□□ -0.07
NPAS3-202ENST00000356141 PROP1O75360 226 aa14.6□□□□□ -0.07
NPAS3-202ENST00000356141 GPR12P47775 334 aa14.6□□□□□ -0.07
NPAS3-202ENST00000356141 DYNLT3P51808 116 aa14.6□□□□□ -0.07
NPAS3-202ENST00000356141 ZDHHC16Q969W1 377 aa14.6□□□□□ -0.07
NPAS3-202ENST00000356141 SNX22Q96L94 193 aa14.6□□□□□ -0.07
NPAS3-202ENST00000356141 RHOFQ9HBH0 211 aa14.6□□□□□ -0.07
NPAS3-202ENST00000356141 CALYQ9NYX4 217 aa14.6□□□□□ -0.07
NPAS3-202ENST00000356141 CHTOPQ9Y3Y2 248 aaKnown RBP14.6□□□□□ -0.07
NPAS3-202ENST00000356141 IFNL4K9M1U5 179 aa14.6□□□□□ -0.07
NPAS3-202ENST00000356141 SPANXN5Q5MJ07 72 aa14.6□□□□□ -0.07
NPAS3-202ENST00000356141 TMEM182Q6ZP80 229 aaPredicted RBP14.6□□□□□ -0.07
NPAS3-202ENST00000356141 KCNJ16Q9NPI9 418 aa14.6□□□□□ -0.07
NPAS3-202ENST00000356141 FCN3O75636 299 aa14.59□□□□□ -0.07
NPAS3-202ENST00000356141 TUBG1P23258 451 aa14.59□□□□□ -0.07
NPAS3-202ENST00000356141 REG1BP48304 166 aa14.59□□□□□ -0.07
NPAS3-202ENST00000356141 TUBG2Q9NRH3 451 aa14.59□□□□□ -0.07
NPAS3-202ENST00000356141 CLN8Q9UBY8 286 aa14.59□□□□□ -0.07
NPAS3-202ENST00000356141 CELSR2Q9HCU4 2923 aa14.59□□□□□ -0.07
NPAS3-202ENST00000356141 B9A039 149 aa14.59□□□□□ -0.07
NPAS3-202ENST00000356141 CRYBA1P05813 215 aa14.59□□□□□ -0.07
NPAS3-202ENST00000356141 AVPI1Q5T686 147 aa14.59□□□□□ -0.07
NPAS3-202ENST00000356141 OR8G2PQ6IF36 304 aa14.59□□□□□ -0.07
NPAS3-202ENST00000356141 ODF3L1Q8IXM7 274 aa14.59□□□□□ -0.07
NPAS3-202ENST00000356141 LYG1Q8N1E2 194 aa14.59□□□□□ -0.07
NPAS3-202ENST00000356141 BARX1Q9HBU1 254 aaPredicted RBP14.59□□□□□ -0.07
NPAS3-202ENST00000356141 C19orf12Q9NSK7 152 aa14.59□□□□□ -0.07
NPAS3-202ENST00000356141 PRH1P02810 166 aa14.58□□□□□ -0.08
NPAS3-202ENST00000356141 OPN1MWP04001 364 aa14.58□□□□□ -0.08
NPAS3-202ENST00000356141 OPN1MW2P0DN77 364 aa14.58□□□□□ -0.08
NPAS3-202ENST00000356141 OPN1MW3P0DN78 364 aa14.58□□□□□ -0.08
NPAS3-202ENST00000356141 SPCS3P61009 180 aa14.58□□□□□ -0.08
NPAS3-202ENST00000356141 SRPXP78539 464 aa14.58□□□□□ -0.08
NPAS3-202ENST00000356141 MORN2Q502X0 79 aa14.58□□□□□ -0.08
NPAS3-202ENST00000356141 TCF23Q7RTU1 214 aa14.58□□□□□ -0.08
NPAS3-202ENST00000356141 TMEM252Q8N6L7 170 aa14.58□□□□□ -0.08
NPAS3-202ENST00000356141 RNASE6Q93091 150 aaKnown RBP14.58□□□□□ -0.08
NPAS3-202ENST00000356141 RHOVQ96L33 236 aa14.58□□□□□ -0.08
NPAS3-202ENST00000356141 LIN7CQ9NUP9 197 aaKnown RBP14.58□□□□□ -0.08
NPAS3-202ENST00000356141 TNCP24821 2201 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms