RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ZNF525Q8N782 197 aa13.84□□□□□ -0.19
SAMM50-201ENST00000350028 DEFB108BQ8NET1 73 aa13.84□□□□□ -0.19
SAMM50-201ENST00000350028 SCGB1C1Q8TD33 95 aa13.84□□□□□ -0.19
SAMM50-201ENST00000350028 WFIKKN1Q96NZ8 548 aa13.84□□□□□ -0.19
SAMM50-201ENST00000350028 PBDC1Q9BVG4 233 aa13.84□□□□□ -0.19
SAMM50-201ENST00000350028 EGLN1Q9GZT9 426 aa13.84□□□□□ -0.19
SAMM50-201ENST00000350028 GFOD1Q9NXC2 390 aa13.84□□□□□ -0.19
SAMM50-201ENST00000350028 CLN8Q9UBY8 286 aa13.84□□□□□ -0.19
SAMM50-201ENST00000350028 A0A1B0GW64 132 aa13.83□□□□□ -0.2
SAMM50-201ENST00000350028 BTBD17A6NE02 478 aa13.83□□□□□ -0.2
SAMM50-201ENST00000350028 PROP1O75360 226 aa13.83□□□□□ -0.2
SAMM50-201ENST00000350028 HPRT1P00492 218 aa13.83□□□□□ -0.2
SAMM50-201ENST00000350028 OR8U8P0C7N1 319 aa13.83□□□□□ -0.2
SAMM50-201ENST00000350028 SELLP14151 372 aa13.83□□□□□ -0.2
SAMM50-201ENST00000350028 CASP6P55212 293 aa13.83□□□□□ -0.2
SAMM50-201ENST00000350028 SPANXN5Q5MJ07 72 aa13.83□□□□□ -0.2
SAMM50-201ENST00000350028 TMEM14EPQ6UXP3 125 aa13.83□□□□□ -0.2
SAMM50-201ENST00000350028 CORO2AQ92828 525 aa13.83□□□□□ -0.2
SAMM50-201ENST00000350028 CCL13Q99616 98 aa13.83□□□□□ -0.2
SAMM50-201ENST00000350028 SCRT1Q9BWW7 348 aa13.83□□□□□ -0.2
SAMM50-201ENST00000350028 PARD6GQ9BYG4 376 aaPredicted RBP13.83□□□□□ -0.2
SAMM50-201ENST00000350028 RFNGQ9Y644 331 aa13.83□□□□□ -0.2
SAMM50-201ENST00000350028 DYSFO75923 2080 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 NKX6-3A6NJ46 265 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 ZNF729A6NN14 1252 aaPredicted RBP13.82□□□□□ -0.2
SAMM50-201ENST00000350028 FAM90A9PA6NNJ1 464 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 FAM157AC9JC47 383 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 M0R1X1 148 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 TSPAN4O14817 238 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 RBFOX2O43251 390 aaKnown RBP eCLIP13.82□□□□□ -0.23e-8■■□□□ 11.8
SAMM50-201ENST00000350028 DSCAMO60469 2012 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 GYPAP02724 150 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 KIR2DS2P43631 304 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 CCL8P80075 99 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 ARL16Q0P5N6 197 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 PKD1L2Q7Z442 2459 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 HAPLN4Q86UW8 402 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.82□□□□□ -0.2
SAMM50-201ENST00000350028 R3HDM4Q96D70 268 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 CIB3Q96Q77 187 aaPredicted RBP13.82□□□□□ -0.2
SAMM50-201ENST00000350028 IFI27L2Q9H2X8 130 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 PRELID3BQ9Y3B1 194 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 KPTNQ9Y664 436 aa13.82□□□□□ -0.2
SAMM50-201ENST00000350028 TPRP12270 2363 aaKnown RBP13.82□□□□□ -0.2
SAMM50-201ENST00000350028 TRGV8A0A0C4DH27 118 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 C9JQL5 133 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 RUNX1Q01196 453 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 THNSL2Q86YJ6 484 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 C1orf87Q8N0U7 546 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 LILRB2Q8N423 598 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 HIPK2Q9H2X6 1198 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 LINC00574Q9H8X3 128 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 TRAV38-1A0A0B4J264 116 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 MARCH11A6NNE9 402 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 PPIHO43447 177 aaKnown RBP13.81□□□□□ -0.2
SAMM50-201ENST00000350028 LY86O95711 162 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 H2AFB1P0C5Y9 115 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 ZNF134P52741 427 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 TLE1Q04724 770 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 TLE4Q04727 773 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 ATP6V1FQ16864 119 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 LRRC75BQ2VPJ9 315 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 NCMAPQ5T1S8 102 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 ADAM5Q6NVV9 412 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 DUX4L9Q6RFH8 374 aaPredicted RBP13.81□□□□□ -0.2
SAMM50-201ENST00000350028 PLPPR2Q96GM1 343 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 PSMG3Q9BT73 122 aaPredicted RBP13.81□□□□□ -0.2
SAMM50-201ENST00000350028 ABHD14AQ9BUJ0 271 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 EIF5A2Q9GZV4 153 aaKnown RBP13.81□□□□□ -0.2
SAMM50-201ENST00000350028 SMDT1Q9H4I9 107 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 IDI2-AS1Q9NZ38 188 aa13.81□□□□□ -0.2
SAMM50-201ENST00000350028 MAP1BP46821 2468 aaKnown RBP13.81□□□□□ -0.2
SAMM50-201ENST00000350028 RAI1Q7Z5J4 1906 aaPredicted RBP13.8□□□□□ -0.2
SAMM50-201ENST00000350028 FAM74A7A6NL05 159 aa13.8□□□□□ -0.2
SAMM50-201ENST00000350028 NUPL2O15504 423 aaKnown RBP13.8□□□□□ -0.2
SAMM50-201ENST00000350028 FCGR3BO75015 233 aa13.8□□□□□ -0.2
SAMM50-201ENST00000350028 LINC00205P59089 165 aa13.8□□□□□ -0.2
SAMM50-201ENST00000350028 FAM74A3Q4VXF1 159 aa13.8□□□□□ -0.2
SAMM50-201ENST00000350028 FAM216BQ8N7L0 139 aa13.8□□□□□ -0.2
SAMM50-201ENST00000350028 KDF1Q8NAX2 398 aaPredicted RBP13.8□□□□□ -0.2
SAMM50-201ENST00000350028 DTD1Q8TEA8 209 aa13.8□□□□□ -0.2
SAMM50-201ENST00000350028 S1PR3Q99500 378 aa13.8□□□□□ -0.2
SAMM50-201ENST00000350028 FBXO7Q9Y3I1 522 aa13.8□□□□□ -0.2
SAMM50-201ENST00000350028 hADV38S2A0JD32 116 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 HBE1P02100 147 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 RAB2AP61019 212 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 SLC38A11Q08AI6 406 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 KLRB1Q12918 225 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 RPL39P5Q59GN2 51 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 CT45A1Q5HYN5 189 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 SPSB3Q6PJ21 355 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 TGIF2LYQ8IUE0 185 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 CT45A3Q8NHU0 189 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 SAP30LQ9HAJ7 183 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 DCAF16Q9NXF7 216 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 TLN1Q9Y490 2541 aaKnown RBP13.79□□□□□ -0.2
SAMM50-201ENST00000350028 TANC2Q9HCD6 1990 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 DSCAML1Q8TD84 2053 aa13.79□□□□□ -0.2
SAMM50-201ENST00000350028 SHISA9B4DS77 424 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 SLC31A2O15432 143 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms