RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 HIST1H2BKO60814 126 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 HIST1H2BJP06899 126 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 RD3LP0DJH9 198 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 HIST1H2BOP23527 126 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 HIST1H2BBP33778 126 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 HIST1H2BDP58876 126 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 RAB11AP62491 216 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 HIST1H2BCP62807 126 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 HIST2H2BEQ16778 126 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.79■□□□□ 0.28
SPG7-202ENST00000341316 PRSS33Q8NF86 280 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 HIST1H2BHQ93079 126 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 HIST1H2BNQ99877 126 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 HIST1H2BMQ99879 126 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 RPRMQ9NS64 109 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 ZFP92A6NM28 416 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 IFNL4K9M1U5 179 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 ZNF816Q0VGE8 651 aaPredicted RBP16.79■□□□□ 0.28
SPG7-202ENST00000341316 FAM90A2PQ658T7 463 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 Q6ZS92 163 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 FAM169BQ8N8A8 192 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 ZNF665Q9H7R5 613 aa16.79■□□□□ 0.28
SPG7-202ENST00000341316 PTPRZ1P23471 2315 aaPredicted RBP16.78■□□□□ 0.28
SPG7-202ENST00000341316 RNF212BA8MTL3 300 aa16.78■□□□□ 0.28
SPG7-202ENST00000341316 KRASP01116 189 aa16.78■□□□□ 0.28
SPG7-202ENST00000341316 S100A2P29034 98 aa16.78■□□□□ 0.28
SPG7-202ENST00000341316 G6PCP35575 357 aa16.78■□□□□ 0.28
SPG7-202ENST00000341316 LCN15Q6UWW0 184 aa16.78■□□□□ 0.28
SPG7-202ENST00000341316 OR10G4Q8NGN3 311 aa16.78■□□□□ 0.28
SPG7-202ENST00000341316 CHD3Q12873 2000 aaKnown RBP16.78■□□□□ 0.28
SPG7-202ENST00000341316 C17orf98A8MV24 154 aa16.77■□□□□ 0.28
SPG7-202ENST00000341316 DEFB108AA8MXU0 73 aa16.77■□□□□ 0.28
SPG7-202ENST00000341316 M0R1B8 84 aa16.77■□□□□ 0.28
SPG7-202ENST00000341316 TRGC2P03986 189 aa16.77■□□□□ 0.28
SPG7-202ENST00000341316 P0C879 139 aa16.77■□□□□ 0.28
SPG7-202ENST00000341316 PRDX2P32119 198 aa16.77■□□□□ 0.28
SPG7-202ENST00000341316 RTP5Q14D33 572 aa16.77■□□□□ 0.28
SPG7-202ENST00000341316 ZNF787Q6DD87 383 aa16.77■□□□□ 0.28
SPG7-202ENST00000341316 ZNF525Q8N782 197 aa16.77■□□□□ 0.28
SPG7-202ENST00000341316 ZBTB34Q8NCN2 500 aa16.77■□□□□ 0.28
SPG7-202ENST00000341316 GAR1Q9NY12 217 aaKnown RBP16.77■□□□□ 0.28
SPG7-202ENST00000341316 WASF3Q9UPY6 502 aa16.77■□□□□ 0.28
SPG7-202ENST00000341316 IGKV1D-17A0A075B6S4 117 aa16.77■□□□□ 0.27
SPG7-202ENST00000341316 ZNF737O75373 536 aa16.77■□□□□ 0.27
SPG7-202ENST00000341316 BCL2P10415 239 aa16.77■□□□□ 0.27
SPG7-202ENST00000341316 FGF8P55075 233 aaPredicted RBP16.77■□□□□ 0.27
SPG7-202ENST00000341316 EDDM3AQ14507 147 aa16.77■□□□□ 0.27
SPG7-202ENST00000341316 ZNF726P1Q15940 193 aa16.77■□□□□ 0.27
SPG7-202ENST00000341316 CDPF1Q6NVV7 123 aa16.77■□□□□ 0.27
SPG7-202ENST00000341316 SSX7Q7RTT5 188 aa16.77■□□□□ 0.27
SPG7-202ENST00000341316 RBMXL3Q8N7X1 1067 aaKnown RBP16.77■□□□□ 0.27
SPG7-202ENST00000341316 SCGB1C1Q8TD33 95 aa16.77■□□□□ 0.27
SPG7-202ENST00000341316 NINJ1Q92982 152 aa16.77■□□□□ 0.27
SPG7-202ENST00000341316 CISD1Q9NZ45 108 aaKnown RBP16.77■□□□□ 0.27
SPG7-202ENST00000341316 DMRT1Q9Y5R6 373 aa16.77■□□□□ 0.27
SPG7-202ENST00000341316 ICE1Q9Y2F5 2266 aa16.76■□□□□ 0.27
SPG7-202ENST00000341316 C15orf65H3BRN8 121 aa16.76■□□□□ 0.27
SPG7-202ENST00000341316 S1PR2O95136 353 aa16.76■□□□□ 0.27
SPG7-202ENST00000341316 SPANXN5Q5MJ07 72 aa16.76■□□□□ 0.27
SPG7-202ENST00000341316 LURAP1Q96LR2 239 aa16.76■□□□□ 0.27
SPG7-202ENST00000341316 RBKSQ9H477 322 aa16.76■□□□□ 0.27
SPG7-202ENST00000341316 IGHV3OR15-7A0A075B7D8 119 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 B4DEV8 164 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 ST8SIA5O15466 376 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 NUBP1P53384 320 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 TNFRSF9Q07011 255 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 LTC4SQ16873 150 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 TIMM23BQ5SRD1 257 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 GFI1BQ5VTD9 330 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 LINC00473A8K010 186 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 SRRM5B3KS81 715 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 VHLLQ6RSH7 139 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 C22orf34Q6ZV56 151 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 GCSAMQ8N6F7 178 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 AGMATQ9BSE5 352 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 PSG11Q9UQ72 335 aa16.75■□□□□ 0.27
SPG7-202ENST00000341316 USF3Q68DE3 2245 aa16.74■□□□□ 0.27
SPG7-202ENST00000341316 PDZD11Q5EBL8 140 aa16.74■□□□□ 0.27
SPG7-202ENST00000341316 C1orf174Q8IYL3 243 aa16.74■□□□□ 0.27
SPG7-202ENST00000341316 OR10D4PQ8NGN7 298 aa16.74■□□□□ 0.27
SPG7-202ENST00000341316 PLPPR2Q96GM1 343 aa16.74■□□□□ 0.27
SPG7-202ENST00000341316 FAM210BQ96KR6 192 aa16.74■□□□□ 0.27
SPG7-202ENST00000341316 PIEZO2Q9H5I5 2752 aa16.74■□□□□ 0.27
SPG7-202ENST00000341316 ODAMA1E959 279 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 SEC14L6B5MCN3 397 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 CLDN1O95832 211 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 SOD3P08294 240 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 NKX6-1P78426 367 aaPredicted RBP16.73■□□□□ 0.27
SPG7-202ENST00000341316 C9orf152Q5JTZ5 239 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 C1orf185Q5T7R7 199 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 FAM180AQ6UWF9 173 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 C1orf87Q8N0U7 546 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 LINC00469Q8N7U9 141 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 OR13D1Q8NGV5 346 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 CA5BP1Q8WTZ4 195 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 MBD3L1Q8WWY6 194 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 RCC1LQ96I51 464 aaKnown RBP16.73■□□□□ 0.27
SPG7-202ENST00000341316 OR2V2Q96R30 315 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 HSPB7Q9UBY9 170 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 KLK10O43240 276 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms