RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 CLCC1Q96S66 551 aa13.2□□□□□ -0.3
BRCC3-202ENST00000340647 METTL1Q9UBP6 276 aaKnown RBP13.2□□□□□ -0.3
BRCC3-202ENST00000340647 STUB1Q9UNE7 303 aa13.2□□□□□ -0.3
BRCC3-202ENST00000340647 A0A1W2PN81 502 aa13.19□□□□□ -0.3
BRCC3-202ENST00000340647 NOTOA8MTQ0 251 aa13.19□□□□□ -0.3
BRCC3-202ENST00000340647 M0R1X1 148 aa13.19□□□□□ -0.3
BRCC3-202ENST00000340647 CA2P00918 260 aa13.19□□□□□ -0.3
BRCC3-202ENST00000340647 GSTP1P09211 210 aaKnown RBP13.19□□□□□ -0.3
BRCC3-202ENST00000340647 CHRNA7P36544 502 aa13.19□□□□□ -0.3
BRCC3-202ENST00000340647 SRSF7Q16629 238 aaKnown RBP eCLIP13.19□□□□□ -0.3
BRCC3-202ENST00000340647 C11orf87Q6NUJ2 197 aa13.19□□□□□ -0.3
BRCC3-202ENST00000340647 ZNF562Q6V9R5 426 aa13.19□□□□□ -0.3
BRCC3-202ENST00000340647 H1FOOQ8IZA3 346 aaPredicted RBP13.19□□□□□ -0.3
BRCC3-202ENST00000340647 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.19□□□□□ -0.3
BRCC3-202ENST00000340647 DDB2Q92466 427 aa13.19□□□□□ -0.3
BRCC3-202ENST00000340647 YTHDF1Q9BYJ9 559 aaKnown RBP13.19□□□□□ -0.3
BRCC3-202ENST00000340647 OR2D2Q9H210 308 aa13.19□□□□□ -0.3
BRCC3-202ENST00000340647 ZNF221Q9UK13 617 aa13.19□□□□□ -0.3
BRCC3-202ENST00000340647 VSIG4Q9Y279 399 aa13.19□□□□□ -0.3
BRCC3-202ENST00000340647 SSX5O60225 188 aa13.18□□□□□ -0.3
BRCC3-202ENST00000340647 DIRAS3O95661 229 aa13.18□□□□□ -0.3
BRCC3-202ENST00000340647 SERPINB10P48595 397 aa13.18□□□□□ -0.3
BRCC3-202ENST00000340647 ZNF773Q6PK81 442 aa13.18□□□□□ -0.3
BRCC3-202ENST00000340647 PDPNQ86YL7 162 aa13.18□□□□□ -0.3
BRCC3-202ENST00000340647 LFNGQ8NES3 379 aa13.18□□□□□ -0.3
BRCC3-202ENST00000340647 OR5M8Q8NGP6 311 aa13.18□□□□□ -0.3
BRCC3-202ENST00000340647 OR1N2Q8NGR9 330 aa13.18□□□□□ -0.3
BRCC3-202ENST00000340647 GPR61Q9BZJ8 451 aa13.18□□□□□ -0.3
BRCC3-202ENST00000340647 ATG5Q9H1Y0 275 aa13.18□□□□□ -0.3
BRCC3-202ENST00000340647 FOXA2Q9Y261 457 aaPredicted RBP13.18□□□□□ -0.3
BRCC3-202ENST00000340647 LSM4Q9Y4Z0 139 aaKnown RBP13.18□□□□□ -0.3
BRCC3-202ENST00000340647 A3GALT2U3KPV4 340 aa13.18□□□□□ -0.3
BRCC3-202ENST00000340647 LINC00473A8K010 186 aa13.17□□□□□ -0.3
BRCC3-202ENST00000340647 SLC25A17O43808 307 aa13.17□□□□□ -0.3
BRCC3-202ENST00000340647 IGLV2-14P01704 120 aa13.17□□□□□ -0.3
BRCC3-202ENST00000340647 SDC2P34741 201 aa13.17□□□□□ -0.3
BRCC3-202ENST00000340647 RPS16P62249 146 aaKnown RBP13.17□□□□□ -0.3
BRCC3-202ENST00000340647 ZNF260Q3ZCT1 412 aa13.17□□□□□ -0.3
BRCC3-202ENST00000340647 CDNFQ49AH0 187 aa13.17□□□□□ -0.3
BRCC3-202ENST00000340647 AKIRIN2Q53H80 203 aa13.17□□□□□ -0.3
BRCC3-202ENST00000340647 DEFB121Q5J5C9 76 aa13.17□□□□□ -0.3
BRCC3-202ENST00000340647 PPP1R27Q86WC6 154 aa13.17□□□□□ -0.3
BRCC3-202ENST00000340647 OR5H6Q8NGV6 325 aa13.17□□□□□ -0.3
BRCC3-202ENST00000340647 OR10J5Q8NHC4 309 aa13.17□□□□□ -0.3
BRCC3-202ENST00000340647 FCGR1BQ92637 280 aa13.17□□□□□ -0.3
BRCC3-202ENST00000340647 SLC35D1Q9NTN3 355 aa13.17□□□□□ -0.3
BRCC3-202ENST00000340647 SEC14L6B5MCN3 397 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 SPDEFO95238 335 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 GADD45AP24522 165 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 RANBP1P43487 201 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 DGCR2P98153 550 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 ZNF616Q08AN1 781 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 VAX1Q5SQQ9 334 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 C9orf66Q5T8R8 295 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 HACD4Q5VWC8 232 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 SFXN4Q6P4A7 337 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 TMEM65Q6PI78 240 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 TPRA1Q86W33 373 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 LGALS14Q8TCE9 139 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 DCUN1D4Q92564 292 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 FLYWCH2Q96CP2 140 aaKnown RBP13.16□□□□□ -0.3
BRCC3-202ENST00000340647 SLC25A38Q96DW6 304 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 PRR25Q96S07 402 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 DAPK2Q9UIK4 370 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 TENM3Q9P273 2699 aa13.16□□□□□ -0.3
BRCC3-202ENST00000340647 IGHV4OR15-8A0A075B7B6 117 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 A0A087WW49 117 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 METTL21EPA6NDL7 271 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 TMEM235A6NFC5 223 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 RBMXL2O75526 392 aaKnown RBP13.15□□□□□ -0.3
BRCC3-202ENST00000340647 DTYMKP23919 212 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 DUTP33316 252 aaKnown RBP13.15□□□□□ -0.3
BRCC3-202ENST00000340647 SLURP1P55000 103 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 ARFRP1Q13795 201 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 PLGLAQ15195 96 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 TMEM177Q53S58 311 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 ACTBL2Q562R1 376 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 UNQ5815/PRO19632Q6UWF5 114 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 TCTEX1D1Q8N7M0 179 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 BVESQ8NE79 360 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 NUDCD2Q8WVJ2 157 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 DPF1Q92782 380 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 DLX4Q92988 240 aaPredicted RBP13.15□□□□□ -0.3
BRCC3-202ENST00000340647 RHOVQ96L33 236 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 MS4A10Q96PG2 267 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 TSNAXQ99598 290 aaKnown RBP13.15□□□□□ -0.3
BRCC3-202ENST00000340647 CENPOQ9BU64 300 aa13.15□□□□□ -0.3
BRCC3-202ENST00000340647 RRP15Q9Y3B9 282 aaKnown RBP13.15□□□□□ -0.3
BRCC3-202ENST00000340647 IGKV1D-13A0A0B4J2D9 117 aa13.14□□□□□ -0.31
BRCC3-202ENST00000340647 LGALS1P09382 135 aaKnown RBP13.14□□□□□ -0.31
BRCC3-202ENST00000340647 IGKV1-13P0DP09 117 aa13.14□□□□□ -0.31
BRCC3-202ENST00000340647 TGFBR1P36897 503 aa13.14□□□□□ -0.31
BRCC3-202ENST00000340647 EIF4EBP1Q13541 118 aaPredicted RBP13.14□□□□□ -0.31
BRCC3-202ENST00000340647 FXYD3Q14802 87 aa13.14□□□□□ -0.31
BRCC3-202ENST00000340647 ARPC1AQ92747 370 aa13.14□□□□□ -0.31
BRCC3-202ENST00000340647 B9D2Q9BPU9 175 aa13.14□□□□□ -0.31
BRCC3-202ENST00000340647 SSR3Q9UNL2 185 aa13.14□□□□□ -0.31
BRCC3-202ENST00000340647 IGHV3-11P01762 117 aa13.13□□□□□ -0.31
BRCC3-202ENST00000340647 APOA2P02652 100 aa13.13□□□□□ -0.31
BRCC3-202ENST00000340647 OR8U8P0C7N1 319 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms