RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 OR10J1P30954 320 aa14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 RPL27AP46776 148 aaKnown RBP14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 MRPL13Q9BYD1 178 aaKnown RBP14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 BET1LQ9NYM9 111 aa14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 CALYQ9NYX4 217 aa14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 JPT1Q9UK76 154 aa14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 ZDHHC8Q9ULC8 765 aa14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 MARCH11A6NNE9 402 aa14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 ZNHIT1O43257 154 aa14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 ADRA2AP08913 450 aa14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 GAS1P54826 345 aa14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 HSPE1P61604 102 aaKnown RBP14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 PAXXQ9BUH6 204 aa14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 TMUB1Q9BVT8 246 aa14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 DOCK4Q8N1I0 1966 aa14.64□□□□□ -0.07
TRAPPC11-201ENST00000334690 TRAV34A0A0B4J273 112 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 REG1BP48304 166 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 TGIF1Q15583 401 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 IMMP1LQ96LU5 166 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 H0YL77 283 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 HYPMO75409 117 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 BTCP35070 178 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 SRP14P37108 136 aaKnown RBP14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 COA4Q9NYJ1 87 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 HEATR5BQ9P2D3 2071 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 ACACAQ13085 2346 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 SYNGR3O43761 229 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 ZIC3O60481 467 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 FADS6Q8N9I5 356 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 OR5P3Q8WZ94 311 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 GSX1Q9H4S2 264 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 CORTO00230 105 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 RFPL3SP0C7P2 107 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 NAT1P18440 290 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 RPL8P62917 257 aaKnown RBP14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 RTP5Q14D33 572 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 TMEM30BQ3MIR4 351 aa14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 PSMG3Q9BT73 122 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC11-201ENST00000334690 F2RL2O00254 374 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 KLK2P20151 261 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 PKIAP61925 76 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 MRPL14Q6P1L8 145 aaKnown RBP14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 TP53RKQ96S44 253 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 OR2T8A6NH00 312 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 ZNF883P0CG24 379 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 G0S2P27469 103 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 WDFY1Q8IWB7 410 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 TIMP4Q99727 224 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 CEACAM18A8MTB9 384 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 TRGC2P03986 189 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 CSN3P07498 182 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 DRAM1Q8N682 238 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 ZNF383Q8NA42 475 aa14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 AKIRIN1Q9H9L7 192 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC11-201ENST00000334690 NDUFA2O43678 99 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 MFAP2P55001 183 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 UCNP55089 124 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 Q6ZT83 130 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 MMD2Q8IY49 270 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 OR4C5Q8NGB2 326 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 ZNF703Q9H7S9 590 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 PLSCR2Q9NRY7 297 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 MSGN1A6NI15 193 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 NAT2P11245 290 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 CTSSP25774 331 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 Q6ZN92 141 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 STARD4Q96DR4 205 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 ZNF552Q9H707 407 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 HIST1H1BP16401 226 aaKnown RBP14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 UCP1P25874 307 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 ERVFRD-1P60508 538 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 GTF2H5Q6ZYL4 71 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 FAM222BQ8WU58 562 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 TMEM140Q9NV12 185 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 CISD1Q9NZ45 108 aaKnown RBP14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 FREM3P0C091 2139 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 A8MWL6 223 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 A8MXK9 166 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 IFNL4K9M1U5 179 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 M0QZK8 103 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 GGCTO75223 188 aaKnown RBP14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 LINC00869P0C866 280 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 WNT5AP41221 380 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 CEBPDP49716 269 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 C2orf68Q2NKX9 166 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 OR2D3Q8NGH3 330 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 SH3BGRL3Q9H299 93 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 WASHC3Q9Y3C0 194 aa14.61□□□□□ -0.07
TRAPPC11-201ENST00000334690 MED12Q93074 2177 aa14.6□□□□□ -0.07
TRAPPC11-201ENST00000334690 SLC35E4Q6ICL7 350 aa14.6□□□□□ -0.07
TRAPPC11-201ENST00000334690 APCSP02743 223 aa14.6□□□□□ -0.07
TRAPPC11-201ENST00000334690 PAFAH1B2P68402 229 aa14.6□□□□□ -0.07
TRAPPC11-201ENST00000334690 ZG16O60844 167 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 SP9P0CG40 484 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 ID4P47928 161 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 MIC13Q5XKP0 118 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 FAM216AQ8WUB2 273 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 SFXN3Q9BWM7 321 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 HIGD1AQ9Y241 93 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 ROS1P08922 2347 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms