RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 FAM90A23PA8MXZ1 464 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 C11orf94C9JXX5 98 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 SYNGR1O43759 233 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 FAM90A15PP0C7V4 464 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 FAM90A13PP0C7W8 464 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 FAM90A14PP0C7W9 464 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 FAM90A24PP0C7X0 464 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 SLC25A6P12236 298 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 GCH1P30793 250 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 TMEM9BQ9NQ34 198 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 PAM16Q9Y3D7 125 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 EML6Q6ZMW3 1958 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 A0A096LPE4 126 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 A0A1W2PPZ6 126 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 HSBP1L1C9JCN9 74 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 TRAPPC6AO75865 159 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 ZNF324BQ6AW86 544 aaPredicted RBP11.64□□□□□ -0.55
SYNE3-201ENST00000334258 GJE1A6NN92 205 aa11.63□□□□□ -0.55
SYNE3-201ENST00000334258 NUPR1O60356 82 aa11.63□□□□□ -0.55
SYNE3-201ENST00000334258 KRASP01116 189 aa11.63□□□□□ -0.55
SYNE3-201ENST00000334258 COX5AP20674 150 aa11.63□□□□□ -0.55
SYNE3-201ENST00000334258 RAC3P60763 192 aa11.63□□□□□ -0.55
SYNE3-201ENST00000334258 ACSF3Q4G176 576 aaPredicted RBP11.63□□□□□ -0.55
SYNE3-201ENST00000334258 WDR74Q6RFH5 385 aaPredicted RBP11.63□□□□□ -0.55
SYNE3-201ENST00000334258 LSM10Q969L4 123 aaKnown RBP11.63□□□□□ -0.55
SYNE3-201ENST00000334258 MANBALQ9NQG1 85 aa11.63□□□□□ -0.55
SYNE3-201ENST00000334258 MUC6Q6W4X9 2439 aa11.63□□□□□ -0.55
SYNE3-201ENST00000334258 PCNX2A6NKB5 2137 aa11.63□□□□□ -0.55
SYNE3-201ENST00000334258 MPLP40238 635 aa11.63□□□□□ -0.55
SYNE3-201ENST00000334258 TNFSF10P50591 281 aa11.63□□□□□ -0.55
SYNE3-201ENST00000334258 SGMS2Q8NHU3 365 aa11.63□□□□□ -0.55
SYNE3-201ENST00000334258 CMTM2Q8TAZ6 248 aa11.63□□□□□ -0.55
SYNE3-201ENST00000334258 PPIAL4AQ9Y536 164 aa11.63□□□□□ -0.55
SYNE3-201ENST00000334258 COL5A1P20908 1838 aaPredicted RBP11.63□□□□□ -0.55
SYNE3-201ENST00000334258 C5orf49A4QMS7 147 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 M0QZK8 103 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 LILRA1O75019 489 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 PTTG1IPP53801 180 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 LEMD1Q68G75 181 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 SLC23A3Q6PIS1 610 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 TCF23Q7RTU1 214 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 ZDHHC11Q9H8X9 412 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 CRIM1Q9NZV1 1036 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 LOC102724200A0A096LPH7 203 aaPredicted RBP11.62□□□□□ -0.55
SYNE3-201ENST00000334258 TMEM238C9JI98 176 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 NUDT10Q8NFP7 164 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 RYDENQ9NUL5 291 aaKnown RBP11.62□□□□□ -0.55
SYNE3-201ENST00000334258 CLN8Q9UBY8 286 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 PGPEP1LA6NFU8 196 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 NDUFB4O95168 129 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 LCN2P80188 198 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 FGFRL1Q8N441 504 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 ZCCHC14Q8WYQ9 949 aaKnown RBP11.62□□□□□ -0.55
SYNE3-201ENST00000334258 SF3B5Q9BWJ5 86 aaKnown RBP11.62□□□□□ -0.55
SYNE3-201ENST00000334258 LIN7CQ9NUP9 197 aaKnown RBP11.62□□□□□ -0.55
SYNE3-201ENST00000334258 TRAPPC2LQ9UL33 140 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 OTOGLQ3ZCN5 2332 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 PIEZO2Q9H5I5 2752 aa11.62□□□□□ -0.55
SYNE3-201ENST00000334258 TYMSP04818 313 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 RNPS1Q15287 305 aaKnown RBP11.61□□□□□ -0.55
SYNE3-201ENST00000334258 SRSF7Q16629 238 aaKnown RBP eCLIP11.61□□□□□ -0.55
SYNE3-201ENST00000334258 CENPVQ7Z7K6 275 aaPredicted RBP11.61□□□□□ -0.55
SYNE3-201ENST00000334258 ZNF573Q86YE8 665 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 OR10P1Q8NGE3 313 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 GPR35Q9HC97 309 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 CEP295Q9C0D2 2601 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 C20orf202A1L168 122 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 SSR4P51571 173 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 TDRG1Q3Y452 100 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 EXPH5Q8NEV8 1989 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 KIR2DL5BA0A0G2JN68 375 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 KIR2DL5BA0A0G2JPC4 375 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 DEGS1O15121 323 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 C1QTNF9P0C862 333 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 CEACAM21Q3KPI0 293 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 SPINK9Q5DT21 86 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 NUFIP2Q7Z417 695 aaKnown RBP11.61□□□□□ -0.55
SYNE3-201ENST00000334258 KIR2DL5AQ8N109 375 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 VN1R17PQ8TDU5 208 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 ABHD3Q8WU67 409 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 WDYHV1Q96HA8 205 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 TMEM147Q9BVK8 224 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 SAMD10Q9BYL1 202 aa11.61□□□□□ -0.55
SYNE3-201ENST00000334258 FGF23Q9GZV9 251 aaPredicted RBP11.61□□□□□ -0.55
SYNE3-201ENST00000334258 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 M0QZ24 198 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 DKK1O94907 266 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 VENTXO95231 258 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 BRS3P32247 399 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 TFF3Q07654 80 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 ZNF585BQ52M93 769 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 DERL1Q9BUN8 251 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 ZNF552Q9H707 407 aaPredicted RBP11.6□□□□□ -0.55
SYNE3-201ENST00000334258 ATMQ13315 3056 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 MDFIC2A0A1B0GVS7 189 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 LRP5LA4QPB2 252 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 CCL25O15444 150 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 ZNF816Q0VGE8 651 aaPredicted RBP11.6□□□□□ -0.55
SYNE3-201ENST00000334258 SMIM15Q7Z3B0 74 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 LINC01551Q86U37 167 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms