RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 EMC4Q5J8M3 183 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 HILPDAQ9Y5L2 63 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 FOXS1O43638 330 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 PITX3O75364 302 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 NOTCH2Q04721 2471 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 STPG4Q8N801 248 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 C5orf17Q8NAS9 161 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 OR8G5Q8NG78 346 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 RPS4Y2Q8TD47 263 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 PERPQ96FX8 193 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 IMMP2LQ96T52 175 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 BRCA1P38398 1863 aaKnown RBP13.25□□□□□ -0.29
LEMD3-201ENST00000308330 PEBP1P30086 187 aaKnown RBP13.25□□□□□ -0.29
LEMD3-201ENST00000308330 TIMM23BQ5SRD1 257 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 C10orf111Q8N326 155 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 PRR7Q8TB68 274 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 PIGLQ9Y2B2 252 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 TRBV9A0A0B4J1U6 114 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 SRD5A2P31213 254 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 KIAA1644Q3SXP7 199 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 OR8A1Q8NGG7 326 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 SDF2L1Q9HCN8 221 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 DIDO1Q9BTC0 2240 aaKnown RBP13.25□□□□□ -0.29
LEMD3-201ENST00000308330 IGHV2-70DA0A0C4DH43 119 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 NKX2-8O15522 239 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 TSPAN13O95857 204 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 RUNX1Q01196 453 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 MGAT2Q10469 447 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 C10orf91Q5T1B1 145 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 SLC25A38Q96DW6 304 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 OR8B2Q96RD0 313 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 TMEM242Q9NWH2 141 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 SBF1O95248 1867 aa13.25□□□□□ -0.29
LEMD3-201ENST00000308330 C3orf80F5H4A9 247 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 CD5LO43866 347 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 LRRC10Q5BKY1 277 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 WFDC12Q8WWY7 111 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 SHISA3A0PJX4 238 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 KCNK15Q9H427 330 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 ABCA4P78363 2273 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 OR2T8A6NH00 312 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 SNAI2O43623 268 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 EDDM3AQ14507 147 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 GAB4Q2WGN9 574 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 ZNF718Q3SXZ3 478 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 LSRQ86X29 649 aaPredicted RBP13.24□□□□□ -0.29
LEMD3-201ENST00000308330 A0A1W2PQM1 296 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 RPS20P60866 119 aaKnown RBP13.24□□□□□ -0.29
LEMD3-201ENST00000308330 OR10D3Q8NH80 312 aa13.24□□□□□ -0.29
LEMD3-201ENST00000308330 HRKO00198 91 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 ADAM20O43506 726 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 LGALS4P56470 323 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 SLC38A11Q08AI6 406 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 BATF2Q8N1L9 274 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 QTRT1Q9BXR0 403 aaKnown RBP13.23□□□□□ -0.29
LEMD3-201ENST00000308330 DOCK6Q96HP0 2047 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 A0A0G2JLM5 398 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 GZMMP51124 257 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 CATR1Q13166 79 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 SRSF6Q13247 344 aaKnown RBP13.23□□□□□ -0.29
LEMD3-201ENST00000308330 OR5D13Q8NGL4 314 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 VSTM2AQ8TAG5 236 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 KCNS1Q96KK3 526 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 FRRS1LQ9P0K9 344 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 TUBD1Q9UJT1 453 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 F11RQ9Y624 299 aaKnown RBP13.23□□□□□ -0.29
LEMD3-201ENST00000308330 A0A1W2PP11 408 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 LMX1BO60663 402 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 FUT6P51993 359 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 FOXB1Q99853 325 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 SLC52A3Q9NQ40 469 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 CEACAM21Q3KPI0 293 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 ZNF841Q6ZN19 808 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 TMEM56Q96MV1 263 aa13.23□□□□□ -0.29
LEMD3-201ENST00000308330 FOCADQ5VW36 1801 aa13.22□□□□□ -0.29
LEMD3-201ENST00000308330 INSM1Q01101 510 aaPredicted RBP13.22□□□□□ -0.29
LEMD3-201ENST00000308330 CYP2G1PQ6ZSU1 146 aa13.22□□□□□ -0.29
LEMD3-201ENST00000308330 OR8B12Q8NGG6 310 aa13.22□□□□□ -0.29
LEMD3-201ENST00000308330 OR51E1Q8TCB6 317 aa13.22□□□□□ -0.29
LEMD3-201ENST00000308330 GPR35Q9HC97 309 aa13.22□□□□□ -0.29
LEMD3-201ENST00000308330 CTXND1A0A1B0GTU2 59 aa13.22□□□□□ -0.29
LEMD3-201ENST00000308330 TMEM189A5PLL7 270 aa13.22□□□□□ -0.29
LEMD3-201ENST00000308330 A6NJY4 79 aa13.22□□□□□ -0.29
LEMD3-201ENST00000308330 SRSF9Q13242 221 aaKnown RBP eCLIP13.22□□□□□ -0.29
LEMD3-201ENST00000308330 CD226Q15762 336 aa13.22□□□□□ -0.29
LEMD3-201ENST00000308330 PSG6Q00889 435 aa13.22□□□□□ -0.29
LEMD3-201ENST00000308330 SPACA5Q96QH8 159 aa13.22□□□□□ -0.29
LEMD3-201ENST00000308330 LOC285556D6RIA3 1793 aa13.22□□□□□ -0.29
LEMD3-201ENST00000308330 HBZP02008 142 aa13.21□□□□□ -0.29
LEMD3-201ENST00000308330 PRSS1P07477 247 aa13.21□□□□□ -0.29
LEMD3-201ENST00000308330 PLAURQ03405 335 aa13.21□□□□□ -0.29
LEMD3-201ENST00000308330 RNPS1Q15287 305 aaKnown RBP13.21□□□□□ -0.29
LEMD3-201ENST00000308330 ZNF418Q8TF45 676 aaPredicted RBP13.21□□□□□ -0.29
LEMD3-201ENST00000308330 SH2D2AQ9NP31 389 aa13.21□□□□□ -0.29
LEMD3-201ENST00000308330 FLRT3Q9NZU0 649 aa13.21□□□□□ -0.29
LEMD3-201ENST00000308330 EFNB2P52799 333 aa13.21□□□□□ -0.29
LEMD3-201ENST00000308330 PSG9Q00887 426 aa13.21□□□□□ -0.29
LEMD3-201ENST00000308330 OR2M7Q8NG81 312 aa13.21□□□□□ -0.29
LEMD3-201ENST00000308330 PLPP3O14495 311 aa13.21□□□□□ -0.29
LEMD3-201ENST00000308330 ISG15P05161 165 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms