RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 BEX5Q5H9J7 111 aa3.48□□□□□ -1.85
USH2A-201ENST00000307340 LY6G6FQ5SQ64 297 aa3.48□□□□□ -1.85
USH2A-201ENST00000307340 FOXB2Q5VYV0 432 aa3.48□□□□□ -1.85
USH2A-201ENST00000307340 OR9G4Q8NGQ1 327 aa3.48□□□□□ -1.85
USH2A-201ENST00000307340 CHAC1Q9BUX1 264 aa3.48□□□□□ -1.85
USH2A-201ENST00000307340 PARD6AQ9NPB6 346 aa3.48□□□□□ -1.85
USH2A-201ENST00000307340 AUP1Q9Y679 476 aa3.48□□□□□ -1.85
USH2A-201ENST00000307340 WDR87Q6ZQQ6 2873 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.47□□□□□ -1.85
USH2A-201ENST00000307340 CEACAM18A8MTB9 384 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 NR2C2APQ86WQ0 139 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 WDFY1Q8IWB7 410 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 KLK6Q92876 244 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 MAP1LC3AQ9H492 121 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 EXPH5Q8NEV8 1989 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 GNB2P62879 340 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 SNAI3Q3KNW1 292 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 TAF15Q92804 592 aaKnown RBP eCLIP3.47□□□□□ -1.85
USH2A-201ENST00000307340 SHANK1Q9Y566 2161 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 OR2W5A6NFC9 320 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 FCMRO60667 390 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 APCSP02743 223 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 ORMDL2Q53FV1 153 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 STARD4Q96DR4 205 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 CLCF1Q9UBD9 225 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 ZNF716A6NP11 495 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 J3QR06 171 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 ZNF79Q15937 498 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 AWAT1Q58HT5 328 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 Q96M66 194 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 DCAF16Q9NXF7 216 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 URGCP-MRPS24S4R325 110 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 PVRIGQ6DKI7 326 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 RBPMS2Q6ZRY4 209 aaKnown RBP3.47□□□□□ -1.85
USH2A-201ENST00000307340 BLNKQ8WV28 456 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 SRD5A3Q9H8P0 318 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 C8orf88P0DMB2 117 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 POLR2IP36954 125 aaKnown RBP3.47□□□□□ -1.85
USH2A-201ENST00000307340 HSPE1P61604 102 aaKnown RBP3.47□□□□□ -1.85
USH2A-201ENST00000307340 EWSR1Q01844 656 aaKnown RBP eCLIP3.47□□□□□ -1.85
USH2A-201ENST00000307340 DGAT2L7PQ6IED9 249 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 FAM89BQ8N5H3 189 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 OR11G2Q8NGC1 345 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 OR4X2Q8NGF9 303 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 SDK2Q58EX2 2172 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 SPTAN1Q13813 2472 aaKnown RBP3.47□□□□□ -1.85
USH2A-201ENST00000307340 ZC3H12DA2A288 527 aaKnown RBP3.47□□□□□ -1.85
USH2A-201ENST00000307340 F8VVB4 439 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 F8VWA3 439 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 AMBPP02760 352 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 LINC00869P0C866 280 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 DLX1P56177 255 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 MYEOVQ96EZ4 313 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 COL4A1P02462 1669 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 TRBV23OR9-2A0A075B6M9 112 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 IGHV1-45A0A0A0MS14 117 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 FFAR1O14842 300 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 MRPS11P82912 194 aaKnown RBP3.47□□□□□ -1.85
USH2A-201ENST00000307340 FZD5Q13467 585 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 Q6ZVH6 145 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 AICDAQ9GZX7 198 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 H3BRM9 83 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 SMAD9O15198 467 aaKnown RBP3.47□□□□□ -1.85
USH2A-201ENST00000307340 CLDND2Q8NHS1 167 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 ATOH1Q92858 354 aaPredicted RBP3.47□□□□□ -1.85
USH2A-201ENST00000307340 ASCL2Q99929 193 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 LENEPQ9Y5L5 61 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 C16orf97H3BN30 126 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 ZNF735P0CB33 412 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 RPL31P62899 125 aaKnown RBP3.47□□□□□ -1.85
USH2A-201ENST00000307340 OR4D5Q8NGN0 318 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 HCFC1R1Q9NWW0 138 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 EFSO43281 561 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 HYPMO75409 117 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 MORN3Q6PF18 240 aaPredicted RBP3.47□□□□□ -1.85
USH2A-201ENST00000307340 MSRB3Q8IXL7 192 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 SOSTQ9BQB4 213 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 DHCR7Q9UBM7 475 aaKnown RBP3.47□□□□□ -1.85
USH2A-201ENST00000307340 HIGD1AQ9Y241 93 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 TRBV20-1A0A075B6N2 111 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 TMEM14DPA8MWL7 114 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 SCGB1C2P0DMR2 95 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 PF4V1P10720 104 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 MPV17P39210 176 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 FAHP16930 419 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 PRDX2P32119 198 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 TMPRSS3P57727 454 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 MINOS1Q5TGZ0 78 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 LURAP1LQ8IV03 231 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 CCL26Q9Y258 94 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 MINOS1-NBL1R4GNA1 71 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 SPTBN2O15020 2390 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 CDC42EP2O14613 210 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 NME2P22392 152 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 LCN15Q6UWW0 184 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 HAPLN4Q86UW8 402 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 PRR7Q8TB68 274 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 YAE1D1Q9NRH1 226 aa3.47□□□□□ -1.85
USH2A-201ENST00000307340 KLF4O43474 513 aa3.46□□□□□ -1.85
USH2A-201ENST00000307340 NEURL1O76050 574 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms