RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 RIGQ13278 110 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 FAM162BQ5T6X4 162 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 ARL17AQ8IVW1 177 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 GRAMD2BQ96HH9 432 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 SF3B5Q9BWJ5 86 aaKnown RBP13.25□□□□□ -0.29
FNDC1-201ENST00000297267 WNT10AQ9GZT5 417 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 SRCAPQ6ZRS2 3230 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 A0A1W2PRX2 142 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 KLF4O43474 513 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 AMY1AP04745 511 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 ACSF3Q4G176 576 aaPredicted RBP13.25□□□□□ -0.29
FNDC1-201ENST00000297267 TM4SF20Q53R12 229 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 FGFRL1Q8N441 504 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 TMEM189A5PLL7 270 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 IBA57Q5T440 356 aaKnown RBP13.25□□□□□ -0.29
FNDC1-201ENST00000297267 WDR73Q6P4I2 378 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 PIPOXQ9P0Z9 390 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 A0A1B0GU03 582 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 TFF3Q07654 80 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 GMPPAQ96IJ6 420 aaPredicted RBP13.25□□□□□ -0.29
FNDC1-201ENST00000297267 CXorf51AA0A1B0GTR3 108 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 BPIFA4PQ86YQ2 179 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 A0A1B0GV90 55 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 OR2T8A6NH00 312 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 GATA2P23769 480 aaPredicted RBP13.24□□□□□ -0.29
FNDC1-201ENST00000297267 SRSF3P84103 164 aaKnown RBP13.24□□□□□ -0.29
FNDC1-201ENST00000297267 ISXQ2M1V0 245 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 FAM209BQ5JX69 171 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 STXBP6Q8NFX7 210 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 G6PC2Q9NQR9 355 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 FTH1P19P0C7X4 201 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 C18orf15Q96N68 181 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 PARLQ9H300 379 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 IGKV3D-20A0A0C4DH25 116 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 SLC17A3O00476 420 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 EIF4E3Q8N5X7 224 aaKnown RBP13.24□□□□□ -0.29
FNDC1-201ENST00000297267 THYN1Q9P016 225 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 CORTO00230 105 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 MRGPRGQ86SM5 289 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 NRIP2Q9BQI9 281 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 GREB1Q4ZG55 1949 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 NRXN2Q9P2S2 1712 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 RRHO14718 337 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 GREM1O60565 184 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 EGR4Q05215 589 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 GCSAMLQ5JQS6 135 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 DLL3Q9NYJ7 618 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 CALYQ9NYX4 217 aa13.24□□□□□ -0.29
FNDC1-201ENST00000297267 RAG2P55895 527 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 KCNK17Q96T54 332 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 FOXC2Q99958 501 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 C5orf24Q7Z6I8 188 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 ZCCHC24Q8N2G6 241 aaKnown RBP13.23□□□□□ -0.29
FNDC1-201ENST00000297267 TMEM252Q8N6L7 170 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 OR1L8Q8NGR8 309 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 AQP3Q92482 292 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 CISD1Q9NZ45 108 aaKnown RBP13.23□□□□□ -0.29
FNDC1-201ENST00000297267 IGLV1-36A0A0B4J1U3 117 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 FCARP24071 287 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 NMBP08949 121 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 TGFBR3LH3BV60 316 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 NUDT3O95989 172 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 BCL2P10415 239 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 COX6A1P12074 109 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 HOXC8P31273 242 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 PKIAP61925 76 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 BIVMQ86UB2 503 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 MRPS18AQ9NVS2 196 aaKnown RBP13.23□□□□□ -0.29
FNDC1-201ENST00000297267 PRNDQ9UKY0 176 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 KCNMB2Q9Y691 235 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 DXOO77932 396 aaKnown RBP13.23□□□□□ -0.29
FNDC1-201ENST00000297267 RND2P52198 227 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 FGF12P61328 243 aa13.23□□□□□ -0.29
FNDC1-201ENST00000297267 J3QR89 54 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 LCN2P80188 198 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 PRSS8Q16651 343 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 STPG1Q5TH74 334 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 ANGPTL4Q9BY76 406 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 MBNL2Q5VZF2 373 aaKnown RBP13.22□□□□□ -0.29
FNDC1-201ENST00000297267 TMEM191AQ9H0A3 160 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 CTXND1A0A1B0GTU2 59 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 A0A1W2PQM1 296 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 ZP1P60852 638 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 GLMPQ8WWB7 406 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 C1QTNF12Q5T7M4 302 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 ASPHD2Q6ICH7 369 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 KLF14Q8TD94 323 aaPredicted RBP13.22□□□□□ -0.29
FNDC1-201ENST00000297267 HSPB8Q9UJY1 196 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 KBTBD11O94819 623 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 ERVFRD-1P60508 538 aa13.22□□□□□ -0.29
FNDC1-201ENST00000297267 XIRP1Q702N8 1843 aaKnown RBP13.21□□□□□ -0.29
FNDC1-201ENST00000297267 KIR2DL2P43627 348 aaPredicted RBP13.21□□□□□ -0.29
FNDC1-201ENST00000297267 RND3P61587 244 aa13.21□□□□□ -0.29
FNDC1-201ENST00000297267 SLC25A47Q6Q0C1 308 aa13.21□□□□□ -0.29
FNDC1-201ENST00000297267 SRSF12Q8WXF0 261 aaKnown RBP13.21□□□□□ -0.29
FNDC1-201ENST00000297267 UNC13CQ8NB66 2214 aa13.21□□□□□ -0.29
FNDC1-201ENST00000297267 ELOA3CA0A087WX78 387 aaPredicted RBP13.21□□□□□ -0.29
FNDC1-201ENST00000297267 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.21□□□□□ -0.29
FNDC1-201ENST00000297267 TBL2Q9Y4P3 447 aaKnown RBP13.21□□□□□ -0.29
FNDC1-201ENST00000297267 ZNF735P0CB33 412 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms