RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 Q6ZT83 130 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 FGFRL1Q8N441 504 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 SRSF9Q13242 221 aaKnown RBP eCLIP14.81□□□□□ -0.04
SHANK1-201ENST00000293441 STPG3Q8N7X2 389 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 TCTAP57738 103 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 HSF4Q9ULV5 492 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 MMP9P14780 707 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 LCN2P80188 198 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 MAS1LP35410 378 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 PLAURQ03405 335 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 COX19Q49B96 90 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 TMEM105Q8N8V8 129 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 ZNF703Q9H7S9 590 aaPredicted RBP14.81□□□□□ -0.04
SHANK1-201ENST00000293441 COX5BP10606 129 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 CD81P60033 236 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 UNC119Q13432 240 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 OR5AU1Q8NGC0 362 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 OR9G1Q8NH87 305 aa14.81□□□□□ -0.04
SHANK1-201ENST00000293441 OR4C46A6NHA9 309 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 OR2A4O95047 310 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 SEC11BP0C7V7 166 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 OR2A7Q96R45 310 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 LYRM7Q5U5X0 104 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 SLC25A33Q9BSK2 321 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 UBE2V2Q15819 145 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 OR4C12Q96R67 309 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 ZNF430Q9H8G1 570 aaPredicted RBP14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A10PA6NDY2 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A18PA6NE21 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A16PA6NEW6 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A20PA6NIJ5 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A8PA6NJQ4 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A7PA6NKC0 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A22PA8MWA6 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A12PA8MX19 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A5PA8MXJ8 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A23PA8MXZ1 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 IGHMP01871 453 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A15PP0C7V4 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A13PP0C7W8 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A14PP0C7W9 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 FAM90A24PP0C7X0 464 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 BTF3P20290 206 aaKnown RBP14.8□□□□□ -0.04
SHANK1-201ENST00000293441 CRYBA2P53672 197 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 CXorf66Q5JRM2 361 aaPredicted RBP14.8□□□□□ -0.04
SHANK1-201ENST00000293441 HSD17B13Q7Z5P4 300 aaPredicted RBP14.8□□□□□ -0.04
SHANK1-201ENST00000293441 LTBRP36941 435 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 AMMECR1LQ6DCA0 310 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 CBLN2Q8IUK8 224 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 OR52M1Q8NGK5 317 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 GPR146Q96CH1 333 aa14.8□□□□□ -0.04
SHANK1-201ENST00000293441 AKIRIN1Q9H9L7 192 aaPredicted RBP14.8□□□□□ -0.04
SHANK1-201ENST00000293441 M0R3E3 92 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 ZNF883P0CG24 379 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 JPT1Q9UK76 154 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 TNFSF18Q9UNG2 199 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 PGPA6NDG6 321 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 MIC13Q5XKP0 118 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 SELENOHQ8IZQ5 122 aaKnown RBP14.79□□□□□ -0.04
SHANK1-201ENST00000293441 PDCD11Q14690 1871 aaKnown RBP14.79□□□□□ -0.04
SHANK1-201ENST00000293441 C7orf77A4D0Y5 90 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 SAXO1Q8IYX7 474 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 ZNRF1Q8ND25 227 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 G6PC2Q9NQR9 355 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 HLA-DQB1P01920 261 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 BRCA1P38398 1863 aaKnown RBP14.79□□□□□ -0.04
SHANK1-201ENST00000293441 C19orf54Q5BKX5 351 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 QTRT1Q9BXR0 403 aaKnown RBP14.79□□□□□ -0.04
SHANK1-201ENST00000293441 FOXD3Q9UJU5 478 aaPredicted RBP14.79□□□□□ -0.04
SHANK1-201ENST00000293441 CHCHD2Q9Y6H1 151 aaPredicted RBP14.79□□□□□ -0.04
SHANK1-201ENST00000293441 ARID2Q68CP9 1835 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 KLF7O75840 302 aaPredicted RBP14.79□□□□□ -0.04
SHANK1-201ENST00000293441 IGLV3-21P80748 117 aaPredicted RBP14.79□□□□□ -0.04
SHANK1-201ENST00000293441 OR4C13Q8NGP0 309 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 RAX2Q96IS3 184 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 CABIN1Q9Y6J0 2220 aa14.79□□□□□ -0.04
SHANK1-201ENST00000293441 PSME4Q14997 1843 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 A0A0G2JMM0 328 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 A0A1W2PPB8 328 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 A0A1W2PRS3 328 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 KIR3DP1A8MWS1 328 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 AP4M1O00189 453 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 S1PR2O95136 353 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 IFI6P09912 130 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 PTGDSP41222 190 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 SMAGPQ0VAQ4 97 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 FXYD3Q14802 87 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 TIMM23BQ5SRD1 257 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 ELF5Q9UKW6 265 aaPredicted RBP14.78□□□□□ -0.04
SHANK1-201ENST00000293441 RAXQ9Y2V3 346 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 ZNF729A6NN14 1252 aaPredicted RBP14.78□□□□□ -0.04
SHANK1-201ENST00000293441 HOXA6P31267 233 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 BPIFA4PQ86YQ2 179 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 POM121Q96HA1 1249 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 PATJQ8NI35 1801 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 ZIC3O60481 467 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 HSPB7Q9UBY9 170 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 SCN10AQ9Y5Y9 1956 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 IGHV3-48P01763 117 aa14.78□□□□□ -0.04
SHANK1-201ENST00000293441 FAM53AQ6NSI3 398 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms