RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 B9A039 149 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 NPIPB11E5RHQ5 1161 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 HTN3P15516 51 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 COMPP49747 757 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-201ENST00000225964 NANOS3P60323 173 aaKnown RBP11.38□□□□□ -0.59
COL1A1-201ENST00000225964 PEAR1Q5VY43 1037 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-201ENST00000225964 ARL17AQ8IVW1 177 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 LSM10Q969L4 123 aaKnown RBP11.38□□□□□ -0.59
COL1A1-201ENST00000225964 CHRNA10Q9GZZ6 450 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 MIXL1Q9H2W2 232 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 DIRC3C9JPN6 131 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 H3BTX0 84 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 NDUFB4O95168 129 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 HIST1H1AQ02539 215 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-201ENST00000225964 MESP2Q0VG99 397 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 MIC13Q5XKP0 118 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 SLC25A47Q6Q0C1 308 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 VKORC1L1Q8N0U8 176 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 FDCSPQ8NFU4 85 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 SSBP3Q9BWW4 388 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-201ENST00000225964 IFT22Q9H7X7 185 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 CIRBPQ14011 172 aaKnown RBP11.38□□□□□ -0.59
COL1A1-201ENST00000225964 OR13C6PQ8NH95 151 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 LHFPL5Q8TAF8 219 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 POLR2AP24928 1970 aaKnown RBP11.37□□□□□ -0.59
COL1A1-201ENST00000225964 VSIG10L2P0DP72 767 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 APOBEC3AP31941 199 aaPredicted RBP11.37□□□□□ -0.59
COL1A1-201ENST00000225964 QTRT1Q9BXR0 403 aaKnown RBP11.37□□□□□ -0.59
COL1A1-201ENST00000225964 HS3ST3B1Q9Y662 390 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 NGFRP08138 427 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 AKIRIN1Q9H9L7 192 aaPredicted RBP11.37□□□□□ -0.59
COL1A1-201ENST00000225964 PCM1Q15154 2024 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 IGHV3-35A0A0C4DH35 117 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 TMEM218A2RU14 115 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 LMX1BO60663 402 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 PTP4A3O75365 173 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 CBLN2Q8IUK8 224 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 NEU1Q99519 415 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 CDC42EP3Q9UKI2 254 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 GEMIN7Q9H840 131 aaKnown RBP11.37□□□□□ -0.59
COL1A1-201ENST00000225964 TMEM74BQ9NUR3 256 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 PGLYRP1O75594 196 aaPredicted RBP11.37□□□□□ -0.59
COL1A1-201ENST00000225964 ISG15P05161 165 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 OR4A47Q6IF82 309 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 PQLC2Q6ZP29 291 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 DLL3Q9NYJ7 618 aa11.37□□□□□ -0.59
COL1A1-201ENST00000225964 A0A1W2PPC1 479 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 GDF9O60383 454 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 SELENOTP62341 195 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 FAM159AQ6UWV7 190 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 OR9G1Q8NH87 305 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 PLAC1Q9HBJ0 212 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 DLEC1Q9Y238 1755 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 A0A087X0M5 115 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 A0A1B0GX30 115 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 C7orf77A4D0Y5 90 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 PSMB11A5LHX3 300 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 FBLL1A6NHQ2 334 aaKnown RBP11.36□□□□□ -0.59
COL1A1-201ENST00000225964 TMEM101Q96IK0 257 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 IGKV1-8A0A0C4DH67 115 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 EMP1P54849 157 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 TMEM177Q53S58 311 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 MDKP21741 143 aaPredicted RBP11.36□□□□□ -0.59
COL1A1-201ENST00000225964 CD69Q07108 199 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 FAM168AQ92567 244 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 GPR61Q9BZJ8 451 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 PILRAQ9UKJ1 303 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 C9JCJ5 164 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 IGHV3-48P01763 117 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 RPLP1P05386 114 aaKnown RBP11.36□□□□□ -0.59
COL1A1-201ENST00000225964 RPS20P60866 119 aaKnown RBP11.36□□□□□ -0.59
COL1A1-201ENST00000225964 COPS9Q8WXC6 57 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 KCNK7Q9Y2U2 307 aa11.36□□□□□ -0.59
COL1A1-201ENST00000225964 RBFOX2O43251 390 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL1A1-201ENST00000225964 H1FOOQ8IZA3 346 aaPredicted RBP11.35□□□□□ -0.59
COL1A1-201ENST00000225964 ZNF383Q8NA42 475 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 OR4C13Q8NGP0 309 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 SGMS2Q8NHU3 365 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 SRSF12Q8WXF0 261 aaKnown RBP11.35□□□□□ -0.59
COL1A1-201ENST00000225964 GPHA2Q96T91 129 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 HIST1H4GQ99525 98 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 OR51M1Q9H341 326 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 A0A1W2PP11 408 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 C17orf51A8MQB3 221 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 FOXI3A8MTJ6 420 aaPredicted RBP11.35□□□□□ -0.59
COL1A1-201ENST00000225964 ZIC3O60481 467 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 SELENOHQ8IZQ5 122 aaKnown RBP11.35□□□□□ -0.59
COL1A1-201ENST00000225964 PKIBQ9C010 78 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 IGHV3OR16-13A0A075B7E8 117 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 IGHV3-74A0A0B4J1X5 117 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 AMY1AP04745 511 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 HOXB1P14653 301 aaPredicted RBP11.35□□□□□ -0.59
COL1A1-201ENST00000225964 TMEM91Q6ZNR0 172 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 OR5AC2Q9NZP5 309 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 MRPS16Q9Y3D3 137 aaKnown RBP11.35□□□□□ -0.59
COL1A1-201ENST00000225964 GLIPR1P48060 266 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 NUTF2P61970 127 aaKnown RBP11.35□□□□□ -0.59
COL1A1-201ENST00000225964 TMEM186Q96B77 213 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 DNAJC4Q9NNZ3 241 aa11.35□□□□□ -0.59
COL1A1-201ENST00000225964 S4R3C0 116 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms