RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ELLP55199 621 aaPredicted RBP18.32■□□□□ 0.52
SMARCD2-201ENST00000225742 IGFL3Q6UXB1 125 aa18.32■□□□□ 0.52
SMARCD2-201ENST00000225742 LHX4Q969G2 390 aa18.32■□□□□ 0.52
SMARCD2-201ENST00000225742 YPEL2Q96QA6 119 aa18.32■□□□□ 0.52
SMARCD2-201ENST00000225742 LINC00473A8K010 186 aa18.31■□□□□ 0.52
SMARCD2-201ENST00000225742 TGOLN2O43493 480 aa18.31■□□□□ 0.52
SMARCD2-201ENST00000225742 SOX15O60248 233 aa18.31■□□□□ 0.52
SMARCD2-201ENST00000225742 IGHV3-13P01766 116 aa18.31■□□□□ 0.52
SMARCD2-201ENST00000225742 RPS10P46783 165 aaKnown RBP18.31■□□□□ 0.52
SMARCD2-201ENST00000225742 FGF8P55075 233 aaPredicted RBP18.31■□□□□ 0.52
SMARCD2-201ENST00000225742 OR2B8PP59922 312 aa18.31■□□□□ 0.52
SMARCD2-201ENST00000225742 TIMM23BQ5SRD1 257 aa18.31■□□□□ 0.52
SMARCD2-201ENST00000225742 FAM53AQ6NSI3 398 aaPredicted RBP18.31■□□□□ 0.52
SMARCD2-201ENST00000225742 RAB9BQ9NP90 201 aa18.31■□□□□ 0.52
SMARCD2-201ENST00000225742 ST8SIA5O15466 376 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 RBFOX2O43251 390 aaKnown RBP eCLIP18.3■□□□□ 0.525e-10■■■□□ 17.3
SMARCD2-201ENST00000225742 ZG16O60844 167 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 TFF1P04155 84 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 FGF7P21781 194 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 SEM1Q6ZVN7 128 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 RPP25LQ8N5L8 163 aaKnown RBP18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 CTDSP1Q9GZU7 261 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 SDF2L1Q9HCN8 221 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 IGHV3-43A0A0B4J1X8 118 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 CEBPZOSA8MTT3 80 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 C17orf112F2Z3M2 114 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 CYB5R3P00387 301 aaPredicted RBP18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 HPRT1P00492 218 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 IGHV3-43DP0DP04 118 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 EGR1P18146 543 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 DUTP33316 252 aaKnown RBP18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 RND2P52198 227 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 TPRX1Q8N7U7 411 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 OR13D1Q8NGV5 346 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 RFESDQ8TAC1 157 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 Q8WTZ3 238 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 R3HDM4Q96D70 268 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 ACTR3CQ9C0K3 210 aaPredicted RBP18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 GAB2Q9UQC2 676 aa18.3■□□□□ 0.52
SMARCD2-201ENST00000225742 CHD3Q12873 2000 aaKnown RBP18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 GTF3C1Q12789 2109 aa18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 IGKV1D-17A0A075B6S4 117 aa18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 MARCH11A6NNE9 402 aa18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 F2RL2O00254 374 aa18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 ITGB1BP1O14713 200 aa18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 MDKP21741 143 aaPredicted RBP18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 GLRXP35754 106 aa18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 KIR2DS2P43631 304 aa18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 NUBP1P53384 320 aa18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 RPP30P78346 268 aaKnown RBP18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 MORN2Q502X0 79 aa18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 ACSM6Q6P461 480 aa18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 ZNF709Q8N972 641 aa18.29■□□□□ 0.52
SMARCD2-201ENST00000225742 HOXA4Q00056 320 aaPredicted RBP18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 EDDM3AQ14507 147 aa18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 OR52E5Q8NH55 327 aa18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 MANBALQ9NQG1 85 aa18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 GNG12Q9UBI6 72 aa18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 DMDP11532 3685 aa18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 TMEM250H0YL14 139 aa18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 CLDN34H7C241 214 aa18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 RBMXL2O75526 392 aaKnown RBP18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 PSMB3P49720 205 aa18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 KIAA0141Q14154 515 aaPredicted RBP18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 OR10G9Q8NGN4 311 aa18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 OR10G7Q8NGN6 311 aa18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 PTPRBP23467 1997 aa18.28■□□□□ 0.52
SMARCD2-201ENST00000225742 DEFB108AA8MXU0 73 aa18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 IGKV1D-33P01593 117 aa18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 IGKV1-33P01594 117 aa18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 CD55P08174 381 aa18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 NQO2P16083 231 aa18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 ZNF83P51522 516 aa18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 KLF3P57682 345 aaPredicted RBP18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 MEF2BQ02080 365 aaPredicted RBP18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 FFAR4Q5NUL3 377 aa18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 NCR3LG1Q68D85 454 aa18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 GCSAMQ8N6F7 178 aa18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 MEGF10Q96KG7 1140 aa18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 DCTN5Q9BTE1 182 aa18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 OR6C3Q9NZP0 311 aa18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 NAT8Q9UHE5 227 aa18.27■□□□□ 0.52
SMARCD2-201ENST00000225742 CRYAAP02489 173 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 CXCL1P09341 107 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 SPCS3P61009 180 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 ZNF674Q2M3X9 581 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 PDLIM3Q53GG5 364 aaPredicted RBP18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 WDR25Q64LD2 544 aaPredicted RBP18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 ZDHHC16Q969W1 377 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 ZNF251Q9BRH9 671 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 NPCDR1Q9BY65 106 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 DUSP13Q9UII6 198 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 M0R1B8 84 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 CYB5BO43169 146 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 LHBP01229 141 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 ERVFRD-1P60508 538 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 NKX6-1P78426 367 aaPredicted RBP18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 C1orf185Q5T7R7 199 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 C1orf87Q8N0U7 546 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 S100PBPQ96BU1 408 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms