RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 MARCH11A6NNE9 402 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 SCGB1D1O95968 90 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 OR5G3P0C626 314 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 DTX1Q86Y01 620 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 TMPRSS5Q9H3S3 457 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 BARX1Q9HBU1 254 aaPredicted RBP10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 NAT8Q9UHE5 227 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 PRUNE2Q8WUY3 3088 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 C10orf142B7Z368 130 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 J3QW42 95 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 PGA5P0DJD9 388 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 HOXB1P14653 301 aaPredicted RBP10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 ZNF343Q6P1L6 599 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 RND1Q92730 232 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 SLC35D1Q9NTN3 355 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 HFEQ30201 348 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 STUMQ69YW2 141 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 C20orf204Q6ZNR8 217 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 RCC1LQ96I51 464 aaKnown RBP10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 SNX22Q96L94 193 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 CCL13Q99616 98 aa10.44□□□□□ -0.74
TM9SF4-201ENST00000217315 hADV38S2A0JD32 116 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 C17orf98A8MV24 154 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 TGOLN2O43493 480 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 CD5P06127 495 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 FABP1P07148 127 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 RNFT1Q5M7Z0 435 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 FAM201AQ5SY85 155 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 DPPA3Q6W0C5 159 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 ZDHHC16Q969W1 377 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 ZNF503-AS2A6NEH8 195 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 LYL1P12980 280 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 CD1BP29016 333 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 MEF2BQ02080 365 aaPredicted RBP10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 SRSF6Q13247 344 aaKnown RBP10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 HERPUD1Q15011 391 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 ZNF324BQ6AW86 544 aaPredicted RBP10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 COLCA1Q6ZS62 124 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 OR13A1Q8NGR1 328 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 TMEM204Q9BSN7 226 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 CRIM1Q9NZV1 1036 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 K7N7A8 449 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 CDX4O14627 284 aaPredicted RBP10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 NDUFB3O43676 98 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 GNB1P62873 340 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 ACP7Q6ZNF0 438 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 BAGE3Q86Y29 109 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 BAGE2Q86Y30 109 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 TMEM68Q96MH6 324 aa10.43□□□□□ -0.74
TM9SF4-201ENST00000217315 TRGC2P03986 189 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 MST1LQ2TV78 715 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 TIGITQ495A1 244 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 SLC35E4Q6ICL7 350 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 TMEM171Q8WVE6 324 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 GTF3AQ92664 365 aaKnown RBP10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 RAB24Q969Q5 203 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 BTF3L4Q96K17 158 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 SIRT7Q9NRC8 400 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 TRAV20A0A0B4J274 112 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 B4DEV8 164 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 C9JQL5 133 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 HPRT1P00492 218 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 ZGRF1Q86YA3 2104 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 C19orf67A6NJJ6 358 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 IQCF6A8MYZ5 107 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 FAM90A26D6RGX4 464 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 PHOX2AO14813 284 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 PSPNO60542 156 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 NPY1RP25929 384 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 IL3RAP26951 378 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 SUB1P53999 127 aaKnown RBP eCLIP10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 TAS2R45P59539 299 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 WDR61Q9GZS3 305 aaKnown RBP10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 DVL1O14640 695 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 RAMP3O60896 148 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 GYPAP02724 150 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 REG1BP48304 166 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 B2MP61769 119 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 FOXF2Q12947 444 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 LRRC10Q5BKY1 277 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 NMSQ5H8A3 153 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 FAM78BQ5VT40 261 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 ZNF497Q6ZNH5 498 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 MDS2Q8NDY4 140 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 ZNF251Q9BRH9 671 aa10.42□□□□□ -0.74
TM9SF4-201ENST00000217315 INTS1Q8N201 2190 aaKnown RBP10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 TGIF2-C20orf24A0A0A6YYL0 155 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 SRP19P09132 144 aaKnown RBP10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 SSC4DQ8WTU2 575 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 SAP30LQ9HAJ7 183 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 MANBALQ9NQG1 85 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 MIOXQ9UGB7 285 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 ADAMTS9Q9P2N4 1935 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 TRAV38-1A0A0B4J264 116 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 IGKV1-6A0A0C4DH72 117 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 LY86O95711 162 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 ABHD12Q8N2K0 398 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 CALYQ9NYX4 217 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 IGHV2OR16-5A0A0B4J2B6 119 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 SPINK4O60575 86 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms