RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 C5orf30Q96GV9 206 aa13.72□□□□□ -0.21
MRPL28-201ENST00000199706 RITA1Q96K30 269 aa13.72□□□□□ -0.21
MRPL28-201ENST00000199706 HSPB9Q9BQS6 159 aa13.72□□□□□ -0.21
MRPL28-201ENST00000199706 COMMD3Q9UBI1 195 aa13.72□□□□□ -0.21
MRPL28-201ENST00000199706 RBM7Q9Y580 266 aaKnown RBP13.72□□□□□ -0.21
MRPL28-201ENST00000199706 IGKV1-16P04430 117 aa13.71□□□□□ -0.21
MRPL28-201ENST00000199706 DUTP33316 252 aaKnown RBP13.71□□□□□ -0.21
MRPL28-201ENST00000199706 LGALS7P47929 136 aa13.71□□□□□ -0.21
MRPL28-201ENST00000199706 CBX3Q13185 183 aa13.71□□□□□ -0.21
MRPL28-201ENST00000199706 RTL8BQ17RB0 113 aa13.71□□□□□ -0.21
MRPL28-201ENST00000199706 ZNF660Q6AZW8 331 aaPredicted RBP13.71□□□□□ -0.21
MRPL28-201ENST00000199706 LIN54Q6MZP7 749 aa13.71□□□□□ -0.21
MRPL28-201ENST00000199706 OVCH2Q7RTZ1 564 aa13.71□□□□□ -0.21
MRPL28-201ENST00000199706 GVQW1Q8N7I0 195 aa13.71□□□□□ -0.21
MRPL28-201ENST00000199706 DRAXINQ8NBI3 349 aaPredicted RBP13.71□□□□□ -0.21
MRPL28-201ENST00000199706 FLYWCH2Q96CP2 140 aaKnown RBP13.71□□□□□ -0.21
MRPL28-201ENST00000199706 NOL4LQ96MY1 436 aaPredicted RBP13.71□□□□□ -0.21
MRPL28-201ENST00000199706 OR51J1Q9H342 316 aa13.71□□□□□ -0.21
MRPL28-201ENST00000199706 IFT46Q9NQC8 304 aa13.71□□□□□ -0.21
MRPL28-201ENST00000199706 SLC35D1Q9NTN3 355 aa13.71□□□□□ -0.21
MRPL28-201ENST00000199706 ZFP57Q9NU63 452 aa13.71□□□□□ -0.21
MRPL28-201ENST00000199706 PLXNB1O43157 2135 aa13.7□□□□□ -0.22
MRPL28-201ENST00000199706 IGHV7-81A0A0B4J1V7 117 aa13.7□□□□□ -0.22
MRPL28-201ENST00000199706 SULT1C2O00338 296 aa13.7□□□□□ -0.22
MRPL28-201ENST00000199706 NFYAP23511 347 aaPredicted RBP13.7□□□□□ -0.22
MRPL28-201ENST00000199706 CNTFRP26992 372 aa13.7□□□□□ -0.22
MRPL28-201ENST00000199706 PRSS3P35030 304 aa13.7□□□□□ -0.22
MRPL28-201ENST00000199706 TAS2R46P59540 309 aa13.7□□□□□ -0.22
MRPL28-201ENST00000199706 FOXE3Q13461 319 aa13.7□□□□□ -0.22
MRPL28-201ENST00000199706 TMEM177Q53S58 311 aa13.7□□□□□ -0.22
MRPL28-201ENST00000199706 TEX38Q6PEX7 206 aa13.7□□□□□ -0.22
MRPL28-201ENST00000199706 CLVS1Q8IUQ0 354 aaPredicted RBP13.7□□□□□ -0.22
MRPL28-201ENST00000199706 GPX8Q8TED1 209 aa13.7□□□□□ -0.22
MRPL28-201ENST00000199706 C15orf40Q8WUR7 153 aa13.7□□□□□ -0.22
MRPL28-201ENST00000199706 CCDC59Q9P031 241 aaKnown RBP13.7□□□□□ -0.22
MRPL28-201ENST00000199706 TCRBV4S1A1TA0A5B7 111 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 LINC01548A6NM66 108 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 IGLV2-14P01704 120 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 IGHG4P01861 327 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 ELANEP08246 267 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 ELK1P19419 428 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 VDAC1P21796 283 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 CDK10Q15131 360 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 PSG5Q15238 335 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 TCTEX1D1Q8N7M0 179 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 ZBTB34Q8NCN2 500 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 GIMAP1Q8WWP7 306 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 BORCS5Q969J3 196 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 HSD17B10Q99714 261 aaKnown RBP13.69□□□□□ -0.22
MRPL28-201ENST00000199706 SCOCQ9UIL1 159 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 RBMX2Q9Y388 322 aaKnown RBP13.69□□□□□ -0.22
MRPL28-201ENST00000199706 NOTCH3Q9UM47 2321 aa13.69□□□□□ -0.22
MRPL28-201ENST00000199706 IGKV1D-13A0A0B4J2D9 117 aa13.68□□□□□ -0.22
MRPL28-201ENST00000199706 HPGDSO60760 199 aa13.68□□□□□ -0.22
MRPL28-201ENST00000199706 PPYP01298 95 aa13.68□□□□□ -0.22
MRPL28-201ENST00000199706 IGKV1-13P0DP09 117 aa13.68□□□□□ -0.22
MRPL28-201ENST00000199706 PTHLHP12272 177 aa13.68□□□□□ -0.22
MRPL28-201ENST00000199706 FCGR2CP31995 323 aa13.68□□□□□ -0.22
MRPL28-201ENST00000199706 EIF4EBP1Q13541 118 aaPredicted RBP13.68□□□□□ -0.22
MRPL28-201ENST00000199706 NSUN5P1Q3KNT7 163 aa13.68□□□□□ -0.22
MRPL28-201ENST00000199706 C10orf99Q6UWK7 81 aa13.68□□□□□ -0.22
MRPL28-201ENST00000199706 ZNF329Q86UD4 541 aa13.68□□□□□ -0.22
MRPL28-201ENST00000199706 OSR1Q8TAX0 266 aaPredicted RBP13.68□□□□□ -0.22
MRPL28-201ENST00000199706 NOL3O60936 208 aaKnown RBP13.67□□□□□ -0.22
MRPL28-201ENST00000199706 IGLV2-23P01705 113 aa13.67□□□□□ -0.22
MRPL28-201ENST00000199706 RPS16P62249 146 aaKnown RBP13.67□□□□□ -0.22
MRPL28-201ENST00000199706 RPL23AP62750 156 aaKnown RBP13.67□□□□□ -0.22
MRPL28-201ENST00000199706 DYRK1AQ13627 763 aa13.67□□□□□ -0.22
MRPL28-201ENST00000199706 SPCS2Q15005 226 aa13.67□□□□□ -0.22
MRPL28-201ENST00000199706 C19orf54Q5BKX5 351 aa13.67□□□□□ -0.22
MRPL28-201ENST00000199706 DHRS11Q6UWP2 260 aa13.67□□□□□ -0.22
MRPL28-201ENST00000199706 ZNF562Q6V9R5 426 aa13.67□□□□□ -0.22
MRPL28-201ENST00000199706 ZNF66Q6ZN08 573 aa13.67□□□□□ -0.22
MRPL28-201ENST00000199706 DYNC2LI1Q8TCX1 351 aa13.67□□□□□ -0.22
MRPL28-201ENST00000199706 MYOZ3Q8TDC0 251 aa13.67□□□□□ -0.22
MRPL28-201ENST00000199706 HARBI1Q96MB7 349 aa13.67□□□□□ -0.22
MRPL28-201ENST00000199706 FBXL15Q9H469 300 aa13.67□□□□□ -0.22
MRPL28-201ENST00000199706 RABL2AQ9UBK7 228 aaPredicted RBP13.67□□□□□ -0.22
MRPL28-201ENST00000199706 METTL1Q9UBP6 276 aaKnown RBP13.67□□□□□ -0.22
MRPL28-201ENST00000199706 RABL2BQ9UNT1 228 aa13.67□□□□□ -0.22
MRPL28-201ENST00000199706 MRPS7Q9Y2R9 242 aaKnown RBP13.67□□□□□ -0.22
MRPL28-201ENST00000199706 PRELID3BQ9Y3B1 194 aa13.67□□□□□ -0.22
MRPL28-201ENST00000199706 TNCP24821 2201 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 LINC00473A8K010 186 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 ATP6V0E1O15342 81 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 CRYGBP07316 175 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 AADACP22760 399 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 PSMB8P28062 276 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 PPIFP30405 207 aaKnown RBP13.66□□□□□ -0.22
MRPL28-201ENST00000199706 RCVRNP35243 200 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 LINC00205P59089 165 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 CX3CL1P78423 397 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 PLGLAQ15195 96 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 CXorf66Q5JRM2 361 aaPredicted RBP13.66□□□□□ -0.22
MRPL28-201ENST00000199706 KCTD9Q7L273 389 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 PPP1R27Q86WC6 154 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 MINDY2Q8NBR6 621 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 R3HDM4Q96D70 268 aa13.66□□□□□ -0.22
MRPL28-201ENST00000199706 RBMXL1Q96E39 390 aaKnown RBP13.66□□□□□ -0.22
MRPL28-201ENST00000199706 LINC00527Q9UJ94 153 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms