RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 OR2K2Q8NGT1 345 aa15.25■□□□□ 0.03
TARDBP-228ENST00000629725 OR14A2Q96R54 314 aa15.25■□□□□ 0.03
TARDBP-228ENST00000629725 NEURL2Q9BR09 285 aa15.25■□□□□ 0.03
TARDBP-228ENST00000629725 C9orf16Q9BUW7 83 aa15.25■□□□□ 0.03
TARDBP-228ENST00000629725 TRAV8-7A0A075B6U6 113 aa15.24■□□□□ 0.03
TARDBP-228ENST00000629725 AADACP22760 399 aa15.24■□□□□ 0.03
TARDBP-228ENST00000629725 RPEL1Q2QD12 228 aa15.24■□□□□ 0.03
TARDBP-228ENST00000629725 C6orf141Q5SZD1 244 aa15.24■□□□□ 0.03
TARDBP-228ENST00000629725 SMIM19Q96E16 107 aa15.24■□□□□ 0.03
TARDBP-228ENST00000629725 ABHD14BQ96IU4 210 aa15.24■□□□□ 0.03
TARDBP-228ENST00000629725 TSNAXQ99598 290 aaKnown RBP15.24■□□□□ 0.03
TARDBP-228ENST00000629725 SLC29A1Q99808 456 aa15.24■□□□□ 0.03
TARDBP-228ENST00000629725 MRPS18AQ9NVS2 196 aaKnown RBP15.24■□□□□ 0.03
TARDBP-228ENST00000629725 SLC2A8Q9NY64 477 aa15.24■□□□□ 0.03
TARDBP-228ENST00000629725 RPL36Q9Y3U8 105 aaKnown RBP15.24■□□□□ 0.03
TARDBP-228ENST00000629725 OR2A4O95047 310 aa15.23■□□□□ 0.03
TARDBP-228ENST00000629725 SPDEFO95238 335 aa15.23■□□□□ 0.03
TARDBP-228ENST00000629725 CPEP16870 476 aa15.23■□□□□ 0.03
TARDBP-228ENST00000629725 MECP2P51608 486 aaKnown RBP15.23■□□□□ 0.03
TARDBP-228ENST00000629725 ZNF343Q6P1L6 599 aa15.23■□□□□ 0.03
TARDBP-228ENST00000629725 LAX1Q8IWV1 398 aa15.23■□□□□ 0.03
TARDBP-228ENST00000629725 DEFB125Q8N687 156 aa15.23■□□□□ 0.03
TARDBP-228ENST00000629725 DDB2Q92466 427 aa15.23■□□□□ 0.03
TARDBP-228ENST00000629725 PEMTQ9UBM1 199 aa15.23■□□□□ 0.03
TARDBP-228ENST00000629725 TRBV5-5A0A0J9YX44 114 aa15.22■□□□□ 0.03
TARDBP-228ENST00000629725 LOC100130705A0A1B0GUX0 176 aa15.22■□□□□ 0.03
TARDBP-228ENST00000629725 TRBV12-3P01733 135 aa15.22■□□□□ 0.03
TARDBP-228ENST00000629725 IGKV1-16P04430 117 aa15.22■□□□□ 0.03
TARDBP-228ENST00000629725 CD7P09564 240 aa15.22■□□□□ 0.03
TARDBP-228ENST00000629725 RPS16P62249 146 aaKnown RBP15.22■□□□□ 0.03
TARDBP-228ENST00000629725 DEFA5Q01523 94 aa15.22■□□□□ 0.03
TARDBP-228ENST00000629725 DYRK1AQ13627 763 aa15.22■□□□□ 0.03
TARDBP-228ENST00000629725 Q499Y3 187 aa15.22■□□□□ 0.03
TARDBP-228ENST00000629725 OR2G6Q5TZ20 316 aa15.22■□□□□ 0.03
TARDBP-228ENST00000629725 TMPRSS11AQ6ZMR5 421 aa15.22■□□□□ 0.03
TARDBP-228ENST00000629725 APH1BQ8WW43 257 aa15.22■□□□□ 0.03
TARDBP-228ENST00000629725 FAM46BQ96A09 425 aa15.22■□□□□ 0.03
TARDBP-228ENST00000629725 SRD5A3Q9H8P0 318 aa15.22■□□□□ 0.03
TARDBP-228ENST00000629725 OGG1O15527 345 aa15.21■□□□□ 0.03
TARDBP-228ENST00000629725 FSTP19883 344 aa15.21■□□□□ 0.03
TARDBP-228ENST00000629725 ETV1P50549 477 aa15.21■□□□□ 0.03
TARDBP-228ENST00000629725 CD300EQ496F6 205 aaPredicted RBP15.21■□□□□ 0.03
TARDBP-228ENST00000629725 CDH26Q8IXH8 852 aa15.21■□□□□ 0.03
TARDBP-228ENST00000629725 C10orf67Q8IYJ2 551 aa15.21■□□□□ 0.03
TARDBP-228ENST00000629725 DRAXINQ8NBI3 349 aaPredicted RBP15.21■□□□□ 0.03
TARDBP-228ENST00000629725 BVESQ8NE79 360 aa15.21■□□□□ 0.03
TARDBP-228ENST00000629725 AGMATQ9BSE5 352 aa15.21■□□□□ 0.03
TARDBP-228ENST00000629725 ST6GALNAC5Q9BVH7 336 aa15.21■□□□□ 0.03
TARDBP-228ENST00000629725 TINAGL1Q9GZM7 467 aaPredicted RBP15.21■□□□□ 0.03
TARDBP-228ENST00000629725 PCLOQ9Y6V0 5065 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 A0A1W2PPK0 400 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 OR11H12B2RN74 326 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 AIREO43918 545 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 CAPGP40121 348 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 LGALS7P47929 136 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 SMN1Q16637 294 aaKnown RBP15.2■□□□□ 0.02
TARDBP-228ENST00000629725 YIF1BQ5BJH7 314 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 SNAPC3Q92966 411 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 USMG5Q96IX5 58 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 TMEM68Q96MH6 324 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 NEDD4LQ96PU5 975 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 SULT4A1Q9BR01 284 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 PARP12Q9H0J9 701 aaKnown RBP15.2■□□□□ 0.02
TARDBP-228ENST00000629725 WFDC10AQ9H1F0 79 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 S100A14Q9HCY8 104 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 FGF20Q9NP95 211 aaPredicted RBP15.2■□□□□ 0.02
TARDBP-228ENST00000629725 BABAM2Q9NXR7 383 aa15.2■□□□□ 0.02
TARDBP-228ENST00000629725 A0A0B4J203 849 aa15.19■□□□□ 0.02
TARDBP-228ENST00000629725 ZNF785A8K8V0 405 aa15.19■□□□□ 0.02
TARDBP-228ENST00000629725 ITGB1BP1O14713 200 aa15.19■□□□□ 0.02
TARDBP-228ENST00000629725 RPS11P62280 158 aaKnown RBP eCLIP15.19■□□□□ 0.02
TARDBP-228ENST00000629725 SSBP2P81877 361 aaPredicted RBP15.19■□□□□ 0.02
TARDBP-228ENST00000629725 FAAP24Q9BTP7 215 aa15.19■□□□□ 0.02
TARDBP-228ENST00000629725 CXorf65A6NEN9 183 aa15.18■□□□□ 0.02
TARDBP-228ENST00000629725 WBP4O75554 376 aaKnown RBP15.18■□□□□ 0.02
TARDBP-228ENST00000629725 PDPNQ86YL7 162 aa15.18■□□□□ 0.02
TARDBP-228ENST00000629725 PQLC1Q8N2U9 271 aa15.18■□□□□ 0.02
TARDBP-228ENST00000629725 SVOPQ8N4V2 548 aa15.18■□□□□ 0.02
TARDBP-228ENST00000629725 EDARADDQ8WWZ3 215 aa15.18■□□□□ 0.02
TARDBP-228ENST00000629725 COA4Q9NYJ1 87 aa15.18■□□□□ 0.02
TARDBP-228ENST00000629725 HECTD4Q9Y4D8 3996 aa15.18■□□□□ 0.02
TARDBP-228ENST00000629725 TRBV5-7A0A0A0MS05 114 aa15.17■□□□□ 0.02
TARDBP-228ENST00000629725 PROP1O75360 226 aa15.17■□□□□ 0.02
TARDBP-228ENST00000629725 LALBAP00709 142 aa15.17■□□□□ 0.02
TARDBP-228ENST00000629725 DCKP27707 260 aa15.17■□□□□ 0.02
TARDBP-228ENST00000629725 LINC00205P59089 165 aa15.17■□□□□ 0.02
TARDBP-228ENST00000629725 PJVKQ0ZLH3 352 aa15.17■□□□□ 0.02
TARDBP-228ENST00000629725 PMS2P11Q13670 270 aa15.17■□□□□ 0.02
TARDBP-228ENST00000629725 C6orf201Q7Z4U5 140 aa15.17■□□□□ 0.02
TARDBP-228ENST00000629725 ZNF383Q8NA42 475 aa15.17■□□□□ 0.02
TARDBP-228ENST00000629725 ZNF555Q8NEP9 628 aa15.17■□□□□ 0.02
TARDBP-228ENST00000629725 SETD6Q8TBK2 473 aa15.17■□□□□ 0.02
TARDBP-228ENST00000629725 C11orf54Q9H0W9 315 aaPredicted RBP15.17■□□□□ 0.02
TARDBP-228ENST00000629725 CHMP1AQ9HD42 196 aaPredicted RBP15.17■□□□□ 0.02
TARDBP-228ENST00000629725 GHRLQ9UBU3 117 aa15.17■□□□□ 0.02
TARDBP-228ENST00000629725 DNAH10Q8IVF4 4471 aa15.17■□□□□ 0.02
TARDBP-228ENST00000629725 NUPR2A6NF83 97 aa15.16■□□□□ 0.02
TARDBP-228ENST00000629725 APOA2P02652 100 aa15.16■□□□□ 0.02
TARDBP-228ENST00000629725 ZBTB25P24278 435 aa15.16■□□□□ 0.02
TARDBP-228ENST00000629725 CEACAM6P40199 344 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms