RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 GPX5O75715 221 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 NDUFB8O95169 186 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 MAS1P04201 325 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 IGHV3-43DP0DP04 118 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 ZNF137PP52743 207 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 RPS25P62851 125 aaKnown RBP10.42□□□□□ -0.74
SNX1-214ENST00000625244 PYHIN1Q6K0P9 492 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 SLC25A48Q6ZT89 311 aaKnown RBP10.42□□□□□ -0.74
SNX1-214ENST00000625244 JAGN1Q8N5M9 183 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 TCTEX1D1Q8N7M0 179 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 OR51A2Q8NGJ7 313 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 TNFAIP8L1Q8WVP5 186 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 CST11Q9H112 138 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 RHOFQ9HBH0 211 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 NDUFB11Q9NX14 153 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 GFOD1Q9NXC2 390 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 DMBT1Q9UGM3 2413 aaPredicted RBP10.41□□□□□ -0.74
SNX1-214ENST00000625244 C15orf65H3BRN8 121 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 SDCBPO00560 298 aaPredicted RBP10.41□□□□□ -0.74
SNX1-214ENST00000625244 GABRPO00591 440 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 NBR2O15453 112 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 IGFBP3P17936 291 aaPredicted RBP10.41□□□□□ -0.74
SNX1-214ENST00000625244 MYL9P24844 172 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 RANBP1P43487 201 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 ZNF134P52741 427 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 DYRK1AQ13627 763 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 CD300EQ496F6 205 aaPredicted RBP10.41□□□□□ -0.74
SNX1-214ENST00000625244 ACTBL2Q562R1 376 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 ZNF529Q6P280 563 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 LAX1Q8IWV1 398 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 CDH26Q8IXH8 852 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 SAXO1Q8IYX7 474 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 OR2K2Q8NGT1 345 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 ZNF251Q9BRH9 671 aa10.41□□□□□ -0.74
SNX1-214ENST00000625244 TRAV8-7A0A075B6U6 113 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 MSGN1A6NI15 193 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 TRGV3P03979 118 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 CSTBP04080 98 aaKnown RBP10.4□□□□□ -0.74
SNX1-214ENST00000625244 UCHL1P09936 223 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 ATF4P18848 351 aaPredicted RBP10.4□□□□□ -0.74
SNX1-214ENST00000625244 SRMP19623 302 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 GALP22466 123 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 CX3CL1P78423 397 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 PAX5Q02548 391 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 INSL4Q14641 139 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 RSU1Q15404 277 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 SSX1Q16384 188 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 TIMM50Q3ZCQ8 353 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 SYT6Q5T7P8 510 aaPredicted RBP10.4□□□□□ -0.74
SNX1-214ENST00000625244 GLT8D1Q68CQ7 371 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 ZNF660Q6AZW8 331 aaPredicted RBP10.4□□□□□ -0.74
SNX1-214ENST00000625244 CD200R1LQ6Q8B3 271 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 WFDC3Q8IUB2 231 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 ZNF439Q8NDP4 499 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 OR52M1Q8NGK5 317 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 ARL11Q969Q4 196 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 ORAI1Q96D31 301 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 FAM103A1Q9BTL3 118 aaKnown RBP10.4□□□□□ -0.74
SNX1-214ENST00000625244 GGTLC1Q9BX51 225 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 SSR3Q9UNL2 185 aa10.4□□□□□ -0.74
SNX1-214ENST00000625244 PRSS29PA6NIE9 313 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 FCN1O00602 326 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 PDCD5O14737 125 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 ZNF780AO75290 641 aaPredicted RBP10.39□□□□□ -0.75
SNX1-214ENST00000625244 SC5DO75845 299 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 CALRP27797 417 aaKnown RBP10.39□□□□□ -0.75
SNX1-214ENST00000625244 PSMD7P51665 324 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 FABP5Q01469 135 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 TMEM267Q0VDI3 215 aaPredicted RBP10.39□□□□□ -0.75
SNX1-214ENST00000625244 GPR176Q14439 515 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 CT45A1Q5HYN5 189 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 UNQ5815/PRO19632Q6UWF5 114 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 PPP1R27Q86WC6 154 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 PXT1Q8NFP0 134 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 NPBQ8NG41 125 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 CT45A3Q8NHU0 189 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 ABHD5Q8WTS1 349 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 MUL1Q969V5 352 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 METTL9Q9H1A3 318 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 SLA2Q9H6Q3 261 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 ING4Q9UNL4 249 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 GAB2Q9UQC2 676 aa10.39□□□□□ -0.75
SNX1-214ENST00000625244 TRDV1A0A1B0GX56 115 aa10.38□□□□□ -0.75
SNX1-214ENST00000625244 XRCC3O43542 346 aa10.38□□□□□ -0.75
SNX1-214ENST00000625244 NDUFA3O95167 84 aa10.38□□□□□ -0.75
SNX1-214ENST00000625244 TRBV12-3P01733 135 aa10.38□□□□□ -0.75
SNX1-214ENST00000625244 CD36P16671 472 aa10.38□□□□□ -0.75
SNX1-214ENST00000625244 GZMHP20718 246 aa10.38□□□□□ -0.75
SNX1-214ENST00000625244 ZNF45Q02386 682 aa10.38□□□□□ -0.75
SNX1-214ENST00000625244 AWAT2Q6E213 333 aa10.38□□□□□ -0.75
SNX1-214ENST00000625244 ZNF575Q86XF7 245 aa10.38□□□□□ -0.75
SNX1-214ENST00000625244 LFNGQ8NES3 379 aa10.38□□□□□ -0.75
SNX1-214ENST00000625244 UQCC2Q9BRT2 126 aa10.38□□□□□ -0.75
SNX1-214ENST00000625244 LOC102724200A0A096LPH7 203 aaPredicted RBP10.37□□□□□ -0.75
SNX1-214ENST00000625244 C13orf42A0A1B0GVH6 325 aa10.37□□□□□ -0.75
SNX1-214ENST00000625244 LANCL1O43813 399 aa10.37□□□□□ -0.75
SNX1-214ENST00000625244 HTR3BO95264 441 aa10.37□□□□□ -0.75
SNX1-214ENST00000625244 CD40LGP29965 261 aa10.37□□□□□ -0.75
SNX1-214ENST00000625244 BMI1P35226 326 aa10.37□□□□□ -0.75
SNX1-214ENST00000625244 GUCA2BQ16661 112 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms