RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 DUXBA0A1W2PPF3 345 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 E5RGE8 158 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 M0QYG6 137 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 MFNGO00587 321 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 DVL1O14640 695 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 ZNF737O75373 536 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 NXPH2O95156 264 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 SIX6O95475 246 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 APOC3P02656 99 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 CSTBP04080 98 aaKnown RBP4.32□□□□□ -1.72
SHMT1-211ENST00000618902 GLAP06280 429 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 HCKP08631 526 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 CTXN2P0C2S0 81 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 SEC11BP0C7V7 166 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 PTHLHP12272 177 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 MMP9P14780 707 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 AKR1C4P17516 323 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 EPHA1P21709 976 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 GLRA1P23415 457 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 HOXA1P49639 335 aaPredicted RBP4.32□□□□□ -1.72
SHMT1-211ENST00000618902 CAV2P51636 162 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 LUMP51884 338 aaPredicted RBP4.32□□□□□ -1.72
SHMT1-211ENST00000618902 ATP1B3P54709 279 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 F2RL1P55085 397 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 SNU13P55769 128 aaKnown RBP4.32□□□□□ -1.72
SHMT1-211ENST00000618902 TMEM50BP56557 158 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 S100A12P80511 92 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 PLA2G7Q13093 441 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 UNC119Q13432 240 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 RBM39Q14498 530 aaKnown RBP4.32□□□□□ -1.72
SHMT1-211ENST00000618902 PEA15Q15121 130 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 C4orf48Q5BLP8 95 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 PXDC1Q5TGL8 231 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 NCR3LG1Q68D85 454 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 DHRS7BQ6IAN0 325 aaPredicted RBP4.32□□□□□ -1.72
SHMT1-211ENST00000618902 OR10K2Q6IF99 312 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 Q6P435 159 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 FIP1L1Q6UN15 594 aaKnown RBP4.32□□□□□ -1.72
SHMT1-211ENST00000618902 Q6ZS49 121 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 KCTD9Q7L273 389 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 RTN4RL2Q86UN3 420 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 UBAC2Q8NBM4 344 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 LFNGQ8NES3 379 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 OR51T1Q8NGJ9 327 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 OR5D13Q8NGL4 314 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 LYPD6BQ8NI32 183 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 GCDHQ92947 438 aaPredicted RBP4.32□□□□□ -1.72
SHMT1-211ENST00000618902 SDSLQ96GA7 329 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 LINC00052Q96N35 136 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 TSNAXQ99598 290 aaKnown RBP4.32□□□□□ -1.72
SHMT1-211ENST00000618902 RNF126Q9BV68 326 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 HIPK2Q9H2X6 1198 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 FAM212BQ9NTI7 297 aaPredicted RBP4.32□□□□□ -1.72
SHMT1-211ENST00000618902 NECAP2Q9NVZ3 263 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 PLEKHJ1Q9NW61 149 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 NSG2Q9Y328 171 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 STRAPQ9Y3F4 350 aaKnown RBP4.32□□□□□ -1.72
SHMT1-211ENST00000618902 TMED3Q9Y3Q3 217 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 SOX21Q9Y651 276 aaPredicted RBP4.32□□□□□ -1.72
SHMT1-211ENST00000618902 VWFP04275 2813 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 A0A0A6YYD4 124 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 C13orf42A0A1B0GVH6 325 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 A0A1B0GW64 132 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 MEX3AA1L020 520 aaKnown RBP4.31□□□□□ -1.72
SHMT1-211ENST00000618902 BTBD17A6NE02 478 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 NKX6-3A6NJ46 265 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 FOXI3A8MTJ6 420 aaPredicted RBP4.31□□□□□ -1.72
SHMT1-211ENST00000618902 RNF212BA8MTL3 300 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 FAM25EA8MYX2 175 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 UMAD1C9J7I0 102 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 M0R1W7 72 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 SIGLEC5O15389 551 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 TMPRSS2O15393 492 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 NDUFB3O43676 98 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 PSPNO60542 156 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 CRTAPO75718 401 aaPredicted RBP4.31□□□□□ -1.72
SHMT1-211ENST00000618902 MPIG6BO95866 241 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 KNG1P01042 644 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 PMP2P02689 132 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 TMEM225BP0DP42 221 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 PGAM2P15259 253 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 GNB3P16520 340 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 PRKACAP17612 351 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 S100GP29377 79 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 BLVRBP30043 206 aaPredicted RBP4.31□□□□□ -1.72
SHMT1-211ENST00000618902 PRDX2P32119 198 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 GABRA2P47869 451 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 OR3A1P47881 315 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 SULT1A2P50226 295 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 DLX1P56177 255 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 DEFA5Q01523 94 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 COL10A1Q03692 680 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 PRB3Q04118 309 aaPredicted RBP4.31□□□□□ -1.72
SHMT1-211ENST00000618902 FOXL1Q12952 345 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 IL13RA2Q14627 380 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 C2orf68Q2NKX9 166 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 PIGYQ3MUY2 71 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 MOGAT2Q3SYC2 334 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 KLF17Q5JT82 389 aaPredicted RBP4.31□□□□□ -1.72
SHMT1-211ENST00000618902 C17orf107Q6ZR85 190 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms