RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 S100GP29377 79 aa16.89■□□□□ 0.3
SDHA-220ENST00000617470 DSCR9P59020 149 aa16.89■□□□□ 0.3
SDHA-220ENST00000617470 FAM216BQ8N7L0 139 aa16.89■□□□□ 0.3
SDHA-220ENST00000617470 SCARB1Q8WTV0 552 aa16.89■□□□□ 0.3
SDHA-220ENST00000617470 ARPC5LQ9BPX5 153 aa16.89■□□□□ 0.3
SDHA-220ENST00000617470 NCOR1P1Q9H4R4 102 aa16.89■□□□□ 0.3
SDHA-220ENST00000617470 DSCAML1Q8TD84 2053 aa16.89■□□□□ 0.3
SDHA-220ENST00000617470 PDZD2O15018 2839 aa16.89■□□□□ 0.29
SDHA-220ENST00000617470 IGHV4-30-2A0A087WSY4 118 aa16.89■□□□□ 0.29
SDHA-220ENST00000617470 DUXBA0A1W2PPF3 345 aa16.89■□□□□ 0.29
SDHA-220ENST00000617470 LINC00862A6NCI5 91 aa16.89■□□□□ 0.29
SDHA-220ENST00000617470 NDUFS8O00217 210 aa16.89■□□□□ 0.29
SDHA-220ENST00000617470 SPINT2O43291 252 aa16.89■□□□□ 0.29
SDHA-220ENST00000617470 HKR1P10072 659 aa16.89■□□□□ 0.29
SDHA-220ENST00000617470 EDDM3BP56851 147 aa16.89■□□□□ 0.29
SDHA-220ENST00000617470 UBA52P62987 128 aaKnown RBP16.89■□□□□ 0.29
SDHA-220ENST00000617470 ZNF585BQ52M93 769 aa16.89■□□□□ 0.29
SDHA-220ENST00000617470 FGFRL1Q8N441 504 aa16.89■□□□□ 0.29
SDHA-220ENST00000617470 ZNF645Q8N7E2 425 aa16.89■□□□□ 0.29
SDHA-220ENST00000617470 OR2D2Q9H210 308 aa16.89■□□□□ 0.29
SDHA-220ENST00000617470 A0A0G2JRQ6 117 aa16.88■□□□□ 0.29
SDHA-220ENST00000617470 ADAM20O43506 726 aa16.88■□□□□ 0.29
SDHA-220ENST00000617470 VDAC1P21796 283 aa16.88■□□□□ 0.29
SDHA-220ENST00000617470 ESCO2Q56NI9 601 aa16.88■□□□□ 0.29
SDHA-220ENST00000617470 AGMATQ9BSE5 352 aa16.88■□□□□ 0.29
SDHA-220ENST00000617470 ZNF471Q9BX82 626 aaPredicted RBP16.88■□□□□ 0.29
SDHA-220ENST00000617470 ZNF665Q9H7R5 613 aa16.88■□□□□ 0.29
SDHA-220ENST00000617470 LOXL3P58215 753 aa16.88■□□□□ 0.29
SDHA-220ENST00000617470 TCF23Q7RTU1 214 aa16.88■□□□□ 0.29
SDHA-220ENST00000617470 F5H0A9 414 aaPredicted RBP16.87■□□□□ 0.29
SDHA-220ENST00000617470 F2RL2O00254 374 aa16.87■□□□□ 0.29
SDHA-220ENST00000617470 SIGLEC5O15389 551 aa16.87■□□□□ 0.29
SDHA-220ENST00000617470 TMPRSS2O15393 492 aa16.87■□□□□ 0.29
SDHA-220ENST00000617470 LTC4SQ16873 150 aa16.87■□□□□ 0.29
SDHA-220ENST00000617470 C17orf58Q2M2W7 97 aa16.87■□□□□ 0.29
SDHA-220ENST00000617470 DMBX1Q8NFW5 382 aa16.87■□□□□ 0.29
SDHA-220ENST00000617470 C11orf1Q9H5F2 150 aa16.87■□□□□ 0.29
SDHA-220ENST00000617470 RCL1Q9Y2P8 373 aaKnown RBP16.87■□□□□ 0.29
SDHA-220ENST00000617470 AUP1Q9Y679 476 aa16.87■□□□□ 0.29
SDHA-220ENST00000617470 NOTCH2Q04721 2471 aa16.87■□□□□ 0.29
SDHA-220ENST00000617470 FCN3O75636 299 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 SERPINE2P07093 398 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 RPL30P62888 115 aaKnown RBP16.86■□□□□ 0.29
SDHA-220ENST00000617470 UTF1Q5T230 341 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 LYPD2Q6UXB3 125 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 FAM234AQ9H0X4 552 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 NKX6-3A6NJ46 265 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 ST8SIA3O43173 380 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 NMBP08949 121 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 SMCO1Q147U7 214 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 ZBTB34Q8NCN2 500 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 ABHD14BQ96IU4 210 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 Q96MF0 132 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 FOXC2Q99958 501 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 CALYQ9NYX4 217 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 OR6C3Q9NZP0 311 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 POMT1Q9Y6A1 747 aa16.86■□□□□ 0.29
SDHA-220ENST00000617470 VPS13CQ709C8 3753 aa16.85■□□□□ 0.29
SDHA-220ENST00000617470 TNFRSF13BO14836 293 aaPredicted RBP16.85■□□□□ 0.29
SDHA-220ENST00000617470 ST8SIA5O15466 376 aa16.85■□□□□ 0.29
SDHA-220ENST00000617470 OMGP23515 440 aa16.85■□□□□ 0.29
SDHA-220ENST00000617470 RPL12P30050 165 aaKnown RBP16.85■□□□□ 0.29
SDHA-220ENST00000617470 NUP62P37198 522 aaPredicted RBP16.85■□□□□ 0.29
SDHA-220ENST00000617470 BRWD1-AS2P59051 145 aa16.85■□□□□ 0.29
SDHA-220ENST00000617470 MSMO1Q15800 293 aa16.85■□□□□ 0.29
SDHA-220ENST00000617470 TMEM155Q4W5P6 130 aa16.85■□□□□ 0.29
SDHA-220ENST00000617470 MORN2Q502X0 79 aa16.85■□□□□ 0.29
SDHA-220ENST00000617470 CXorf66Q5JRM2 361 aaPredicted RBP16.85■□□□□ 0.29
SDHA-220ENST00000617470 STOML3Q8TAV4 291 aa16.85■□□□□ 0.29
SDHA-220ENST00000617470 GPR146Q96CH1 333 aa16.85■□□□□ 0.29
SDHA-220ENST00000617470 LIN7CQ9NUP9 197 aaKnown RBP16.85■□□□□ 0.29
SDHA-220ENST00000617470 JPT1Q9UK76 154 aa16.85■□□□□ 0.29
SDHA-220ENST00000617470 PSG11Q9UQ72 335 aa16.85■□□□□ 0.29
SDHA-220ENST00000617470 CCDC168Q8NDH2 2452 aa16.85■□□□□ 0.29
SDHA-220ENST00000617470 MAP1AP78559 2803 aaPredicted RBP16.85■□□□□ 0.29
SDHA-220ENST00000617470 LEUTXA8MZ59 168 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 E5RGE8 158 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 NDUFA2O43678 99 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 IGKV1-5P01602 117 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 ZNF16P17020 682 aaPredicted RBP16.84■□□□□ 0.29
SDHA-220ENST00000617470 PRSS57Q6UWY2 283 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 SPIN2AQ99865 258 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 SPIN2BQ9BPZ2 258 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 NSG2Q9Y328 171 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 VWC2LB2RUY7 222 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 PITX3O75364 302 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 FSTL3O95633 263 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 SLC25A16P16260 332 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 RAB14P61106 215 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 IZUMO4Q1ZYL8 232 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 Q6ZRM9 215 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 BSCL2Q96G97 398 aaPredicted RBP16.84■□□□□ 0.29
SDHA-220ENST00000617470 SDHAF2Q9NX18 166 aa16.84■□□□□ 0.29
SDHA-220ENST00000617470 YPEL1O60688 119 aa16.83■□□□□ 0.28
SDHA-220ENST00000617470 PROP1O75360 226 aa16.83■□□□□ 0.28
SDHA-220ENST00000617470 ZNF134P52741 427 aa16.83■□□□□ 0.28
SDHA-220ENST00000617470 FAM74A1Q5RGS3 127 aa16.83■□□□□ 0.28
SDHA-220ENST00000617470 BTNL3Q6UXE8 466 aa16.83■□□□□ 0.28
SDHA-220ENST00000617470 KRTAP1-3Q8IUG1 177 aa16.83■□□□□ 0.28
SDHA-220ENST00000617470 YPEL2Q96QA6 119 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms